HPV6 E2
Accession: H002800
Protein: E2
Organism: Human papillomavirus type 6
Function
It is responsible for recognition and binding of origin of replication. It exists in two forms such as full length (transcriptional transactivator) and truncated (transcriptional repressor). The ratio of these found in the heterotrimeric complex, formed b
Domain&Motif
| method | domain/motif name | position | length | description | graphical view |
|---|---|---|---|---|---|
| CDD | PPV_E2_N | 2727-3326 | 600 | E2 (early) protein, N terminal; | |
| CDD | PPV_E2_C | 3579-3815 | 237 | E2 (early) protein, C terminal; | |
| CDD | PHA03202 | 3282-3797 | 516 | uracil DNA glycosylase; Provisional | |
| CDD | STKc_GRK1 | 2799-3083 | 285 | Catalytic domain of the Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. GRK1 (also called rhodopsin kinase) belongs to the | |
| CDD | motB | 3288-3581 | 294 | flagellar motor protein MotB; Reviewed | |
| MOTIF_SCAN | 2787-2798 | 12 | |||
| MOTIF_SCAN | 3099-3110 | 12 | |||
| MOTIF_SCAN | 3555-3566 | 12 | |||
| MOTIF_SCAN | 3000-3011 | 12 | |||
| MOTIF_SCAN | 3012-3023 | 12 | |||
| MOTIF_SCAN | 3171-3182 | 12 | |||
| MOTIF_SCAN | 3327-3338 | 12 | |||
| MOTIF_SCAN | 3342-3353 | 12 | |||
| MOTIF_SCAN | 3399-3410 | 12 | |||
| MOTIF_SCAN | 3090-3107 | 18 | |||
| MOTIF_SCAN | 3189-3206 | 18 | |||
| MOTIF_SCAN | 3207-3224 | 18 | |||
| MOTIF_SCAN | 3261-3269 | 9 | |||
| MOTIF_SCAN | 3690-3698 | 9 | |||
| MOTIF_SCAN | 3786-3794 | 9 | |||
| MOTIF_SCAN | 3267-3287 | 21 | |||
| MOTIF_SCAN | 3579-3815 | 237 | |||
| MOTIF_SCAN | 2724-3326 | 603 | |||
| MOTIF_SCAN | 3579-3815 | 237 | |||
| MOTIF_SCAN | 2724-3326 | 603 | |||
| INTERPROSCAN | 3027-3326 | 300 | |||
| INTERPROSCAN | 3534-3821 | 288 | |||
| INTERPROSCAN | 3576-3827 | 252 | |||
| INTERPROSCAN | 2724-3326 | 603 | |||
| INTERPROSCAN | 2724-3311 | 588 | |||
| INTERPROSCAN | 3573-3818 | 246 | |||
| INTERPROSCAN | 3579-3806 | 228 | |||
| MOTIF_SEAR_IN_PROT | 2727-3326 | 600 | |||
| MOTIF_SEAR_IN_PROT | 3579-3815 | 237 | |||
| MOTIF_SEAR_IN_PROT | 2799-3083 | 285 | |||
| MOTIF_SEAR_IN_PROT | 3288-3581 | 294 | |||
| MOTIF_SEAR_IN_PROT | 3306-3407 | 102 | |||
| MOTIF_SEAR_IN_PROT | 3078-3272 | 195 | |||
| MOTIF_SEAR_IN_PROT | 3312-3428 | 117 | |||
| MOTIF_SEAR_IN_PROT | 2724-3311 | 588 | |||
| MOTIF_SEAR_IN_PROT | 3579-3806 | 228 | |||
| MOTIF_SEAR_IN_PROT | 2727-2849 | 123 | |||
| PROSITE_SCAN | 2787-2798 | 12 | |||
| PROSITE_SCAN | 3000-3011 | 12 | |||
| PROSITE_SCAN | 3012-3023 | 12 | |||
| PROSITE_SCAN | 3090-3107 | 18 | |||
| PROSITE_SCAN | 3099-3110 | 12 | |||
| PROSITE_SCAN | 3171-3182 | 12 | |||
| PROSITE_SCAN | 3189-3206 | 18 | |||
| PROSITE_SCAN | 3207-3224 | 18 | |||
| PROSITE_SCAN | 3261-3269 | 9 | |||
| PROSITE_SCAN | 3267-3287 | 21 | |||
| PROSITE_SCAN | 3327-3338 | 12 | |||
| PROSITE_SCAN | 3342-3353 | 12 | |||
| PROSITE_SCAN | 3399-3410 | 12 | |||
| PROSITE_SCAN | 3555-3566 | 12 | |||
| PROSITE_SCAN | 3690-3698 | 9 | |||
| PROSITE_SCAN | 3786-3794 | 9 | |||
| SBASE | 2724-3326 | 603 | |||
| SBASE | 3345-3461 | 117 | |||
| SBASE | 3576-3827 | 252 | |||
| RADAR | 2904-3029 | 126 | |||
| RADAR | 3039-3158 | 120 | |||
| RADAR | 3321-3389 | 69 | |||
| RADAR | 3393-3464 | 72 | |||
| RADAR | 2757-2801 | 45 | |||
| RADAR | 2835-2876 | 42 | |||
| TMPRED_SERVER | 3279-3329 | 51 | |||
| TMPRED_SERVER | 3282-3344 | 63 | |||
| UNIPROTKB | 2724-3311 | 588 | |||
| UNIPROTKB | 3579-3806 | 228 |
Sequence
. . . . . . G:2783
atggaagcaatagccaagcgtttagatgcgtgccaggaacagttgttagaactttatgaa C:60
M E A I A K R L D A C Q E Q L L E L Y E P:20
. . . . . . G:2843
gaaaacagtactgacctaaacaaacatgtactgcattggaaatgcataagacatgaaagt C:60
E N S T D L N K H V L H W K C I R H E S P:20
. . . . . . G:2903
gtattattatataaagcaaaacaaatgggcctaagccacataggaatgcaagtagtgcca C:60
V L L Y K A K Q M G L S H I G M Q V V P P:20
. . . . . . G:2963
ccattaaaggtgtccgaagcaaaaggacataatgccattgaaatgcaaatgcatttagaa C:60
P L K V S E A K G H N A I E M Q M H L E P:20
. . . . . . G:3023
tcattattaaagactgagtatagtatggaaccgtggacattacaagaaacaagttatgaa C:60
S L L K T E Y S M E P W T L Q E T S Y E P:20
. . . . . . G:3083
atgtggcaaacaccacctaaacgctgttttaaaaaacggggcaaaactgtagaagttaaa C:60
M W Q T P P K R C F K K R G K T V E V K P:20
. . . . . . G:3143
tttgatggctgtgcaaacaatacaatggattatgtggtatggacagatgtgtatgtgcag C:60
F D G C A N N T M D Y V V W T D V Y V Q P:20
. . . . . . G:3203
gacactgactcctgggtaaaggtgcatagtatggtagatgctaagggtatatattacaca C:60
D T D S W V K V H S M V D A K G I Y Y T P:20
. . . . . . G:3263
tgtggacaatttaaaacatattatgtaaactttgtaaaagaggcagaaaagtatgggagc C:60
C G Q F K T Y Y V N F V K E A E K Y G S P:20
. . . . . . G:3323
accaaacaatgggaagtatgttatggcagcacagttatatgttctcctgcatctgtatct C:60
T K Q W E V C Y G S T V I C S P A S V S P:20
. . . . . . G:3383
agcactacacaagaagtatccattcctgaatctactacatacacccccgcacagacctcc C:60
S T T Q E V S I P E S T T Y T P A Q T S P:20
. . . . . . G:3443
acccctgtgtcctcaagcacccaggaagacgcagtgcaaacgccgcctagaaaacgagca C:60
T P V S S S T Q E D A V Q T P P R K R A P:20
. . . . . . G:3503
cgaggagtccaacagtcaccttgcaacgccttgtgtgtggcccacattggacccgtggac C:60
R G V Q Q S P C N A L C V A H I G P V D P:20
. . . . . . G:3563
agtggaaaccacaacgtcatcactaacaatcacgaccagcaccaaagaaggaacaacagt C:60
S G N H N V I T N N H D Q H Q R R N N S P:20
. . . . . . G:3623
aacagttcagctacgcctatagtgcaatttcaaggtgaatctaattgtttaaagtgtttt C:60
N S S A T P I V Q F Q G E S N C L K C F P:20
. . . . . . G:3683
agatataggctaaatgacaaacacagacatttatttgatttaatatcatcaacgtggcac C:60
R Y R L N D K H R H L F D L I S S T W H P:20
. . . . . . G:3743
tgggcctcctcaaaggcaccacataaacatgccattgtaactgtaacatatcatagtgag C:60
W A S S K A P H K H A I V T V T Y H S E P:20
. . . . . . G:3803
gaacaaaggcaacagtttttaaatgttgtaaaaataccccctactattagacacaaactg C:60
E Q R Q Q F L N V V K I P P T I R H K L P:20
. . G:3830
gggtttatgtcaatgcacctattgtaa C:27
G F M S M H L L P:8
