HPV6b L1

Accession: H002797
Protein: L1
Organism: Human papillomavirus type 6b

Function

Major capsid protein. It can form virus-like particles. It forms the pentameric assembly unit of the viral shell.

Mutation

5789-5800
5801-5900
5901-6000
6001-6100
6101-6200
6201-6300
6301-6400
6401-6500
6501-6600
6601-6700
6701-6800
6801-6900
6901-7000
7001-7100
7101-7200
7201-7291
Legend:same sensemissenseinsertiondeletion
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Domain&Motif

method domain/motif name position length description graphical view
CDDPHA027785789-72191431major capsid L1 protein; Provisional
CDDLate_protein_L15789-72221434L1 (late) protein;
MOTIF_SCAN7163-717412
MOTIF_SCAN5951-596212
MOTIF_SCAN6422-643312
MOTIF_SCAN6620-663112
MOTIF_SCAN6797-680812
MOTIF_SCAN7004-701512
MOTIF_SCAN7100-711112
MOTIF_SCAN6044-605512
MOTIF_SCAN6086-609712
MOTIF_SCAN6770-678112
MOTIF_SCAN6839-685012
MOTIF_SCAN6962-697312
MOTIF_SCAN7010-702112
MOTIF_SCAN7106-711712
MOTIF_SCAN7142-715312
MOTIF_SCAN6089-610618
MOTIF_SCAN6107-612418
MOTIF_SCAN6182-619918
MOTIF_SCAN6617-663418
MOTIF_SCAN6665-668218
MOTIF_SCAN6740-675718
MOTIF_SCAN5900-59089
MOTIF_SCAN5936-59449
MOTIF_SCAN6062-60709
MOTIF_SCAN6419-64279
MOTIF_SCAN6458-64669
MOTIF_SCAN6782-67909
MOTIF_SCAN7022-70309
MOTIF_SCAN7208-72169
MOTIF_SCAN7280-72889
MOTIF_SCAN5795-581824
MOTIF_SCAN7133-715927
MOTIF_SCAN7226-727348
MOTIF_SCAN7226-727954
MOTIF_SCAN5789-72731485
MOTIF_SCAN5789-72731485
INTERPROSCAN5843-71921350
INTERPROSCAN5792-72701479
INTERPROSCAN5834-589663
INTERPROSCAN5963-603169
INTERPROSCAN6068-614578
INTERPROSCAN6230-628354
INTERPROSCAN6323-639472
INTERPROSCAN6425-648763
INTERPROSCAN6500-657172
INTERPROSCAN6653-672169
INTERPROSCAN6725-679066
INTERPROSCAN6860-691354
INTERPROSCAN7109-718072
INTERPROSCAN5837-71921356
MOTIF_SEAR_IN_PROT5789-72821494
MOTIF_SEAR_IN_PROT5789-72731485
MOTIF_SEAR_IN_PROT5792-72701479
PROSITE_SCAN5795-581824
PROSITE_SCAN5900-59089
PROSITE_SCAN5936-59449
PROSITE_SCAN5951-596212
PROSITE_SCAN6044-605512
PROSITE_SCAN6062-60709
PROSITE_SCAN6086-609712
PROSITE_SCAN6089-610618
PROSITE_SCAN6107-612418
PROSITE_SCAN6182-619918
PROSITE_SCAN6419-64279
PROSITE_SCAN6422-643312
PROSITE_SCAN6458-64669
PROSITE_SCAN6617-663418
PROSITE_SCAN6620-663112
PROSITE_SCAN6665-668218
PROSITE_SCAN6740-675718
PROSITE_SCAN6770-678112
PROSITE_SCAN6782-67909
PROSITE_SCAN6797-680812
PROSITE_SCAN6839-685012
PROSITE_SCAN6962-697312
PROSITE_SCAN7004-701512
PROSITE_SCAN7010-702112
PROSITE_SCAN7022-70309
PROSITE_SCAN7100-711112
PROSITE_SCAN7106-711712
PROSITE_SCAN7133-715927
PROSITE_SCAN7142-715312
PROSITE_SCAN7163-717412
PROSITE_SCAN7208-72169
PROSITE_SCAN7226-727348
PROSITE_SCAN7280-72889
SBASE5789-72131425
RADAR6971-7093123
RADAR7130-7261132
RADAR6107-6259153
RADAR6260-6463204
TMPRED_SERVER6629-668557
TMPRED_SERVER6797-685054
TMPRED_SERVER6890-694051
TMPRED_SERVER6896-695257

Sequence

         .         .         .         .         .         .     G:5848
atgtggcggcctagcgacagcacagtatatgtgcctcctcctaaccctgtatccaaagtt     C:60
M W R P S D S T V Y V P P P N P V S K V      P:20


. . . . . .     G:5908
gttgccacggatgcttatgttactcgcaccaacatattttatcatgccagcagttctaga     C:60
V A T D A Y V T R T N I F Y H A S S S R      P:20


. . . . . .     G:5968
cttcttgcagtgggacatccttatttttccataaaacgggctaacaaaactgttgtgcca     C:60
L L A V G H P Y F S I K R A N K T V V P      P:20


. . . . . .     G:6028
aaggtgtcaggatatcaatacagggtatttaaggtggtgttaccagatcctaacaaattt     C:60
K V S G Y Q Y R V F K V V L P D P N K F      P:20


. . . . . .     G:6088
gcattgcctgactcgtctcttttcgatcccacaacacaacgtttagtatgggcatgcaca     C:60
A L P D S S L F D P T T Q R L V W A C T      P:20


. . . . . .     G:6148
ggcctagaggtgggcaggggacagccattaggtgtgggtgtaagtggacatcctttccta     C:60
G L E V G R G Q P L G V G V S G H P F L      P:20


. . . . . .     G:6208
aataaatatgatgatgttgaaaattcagggagtggtggtaaccctggacaggataacagg     C:60
N K Y D D V E N S G S G G N P G Q D N R      P:20


. . . . . .     G:6268
gttaatgtaggtatggattataaacaaacacaattatgcatggttggatgtgccccccct     C:60
V N V G M D Y K Q T Q L C M V G C A P P      P:20


. . . . . .     G:6328
ttgggcgagcattggggtaaaggtaaacagtgtactaatacacctgtacaggctggtgac     C:60
L G E H W G K G K Q C T N T P V Q A G D      P:20


. . . . . .     G:6388
tgcccgcccttagaacttattaccagtgttatacaggatggcgatatggttgacacaggc     C:60
C P P L E L I T S V I Q D G D M V D T G      P:20


. . . . . .     G:6448
tttggtgctatgaattttgctgatttgcagaccaataaatcagatgttcctattgacata     C:60
F G A M N F A D L Q T N K S D V P I D I      P:20


. . . . . .     G:6508
tgtggcactacatgtaaatatccagattatttacaaatggctgcagacccatatggtgat     C:60
C G T T C K Y P D Y L Q M A A D P Y G D      P:20


. . . . . .     G:6568
agattatttttttttctacggaaggaacaaatgtttgccagacatttttttaacagggct     C:60
R L F F F L R K E Q M F A R H F F N R A      P:20


. . . . . .     G:6628
ggcgaggtgggggaacctgtgcctgatacacttataattaagggtagtggaaatcgcacg     C:60
G E V G E P V P D T L I I K G S G N R T      P:20


. . . . . .     G:6688
tctgtagggagtagtatatatgttaacaccccgagcggctctttggtgtcctctgaggca     C:60
S V G S S I Y V N T P S G S L V S S E A      P:20


. . . . . .     G:6748
caattgtttaataagccatattggctacaaaaagcccagggacataacaatggtatttgt     C:60
Q L F N K P Y W L Q K A Q G H N N G I C      P:20


. . . . . .     G:6808
tggggtaatcaactgtttgttactgtggtagataccacacgcagtaccaacatgacatta     C:60
W G N Q L F V T V V D T T R S T N M T L      P:20


. . . . . .     G:6868
tgtgcatccgtaactacatcttccacatacaccaattctgattataaagagtacatgcgt     C:60
C A S V T T S S T Y T N S D Y K E Y M R      P:20


. . . . . .     G:6928
catgtggaagagtatgatttacaatttatttttcaattatgtagcattacattgtctgct     C:60
H V E E Y D L Q F I F Q L C S I T L S A      P:20


. . . . . .     G:6988
gaagtaatggcctatattcacacaatgaatccctctgttttggaagactggaactttggg     C:60
E V M A Y I H T M N P S V L E D W N F G      P:20


. . . . . .     G:7048
ttatcgcctcccccaaatggtacattagaagatacctataggtatgtgcagtcacaggcc     C:60
L S P P P N G T L E D T Y R Y V Q S Q A      P:20


. . . . . .     G:7108
attacctgtcaaaagcccactcctgaaaaggaaaagccagatccctataagaaccttagt     C:60
I T C Q K P T P E K E K P D P Y K N L S      P:20


. . . . . .     G:7168
ttttgggaggttaatttaaaagaaaagttttctagtgaattggatcagtatcctttggga     C:60
F W E V N L K E K F S S E L D Q Y P L G      P:20


. . . . . .     G:7228
cgcaagtttttgttacaaagtggatataggggacggtcctctattcgtacaggtgttaag     C:60
R K F L L Q S G Y R G R S S I R T G V K      P:20


. . . . . .     G:7288
cgccctgctgtttccaaagcctctgctgcccctaaacgtaagcgcgccaaaactaaaagg     C:60
R P A V S K A S A A P K R K R A K T K R      P:20


     G:7291
taa      C:3
     P:0


Legend:gene mutationamino acid mutation