HPV6b E5a
Accession: H002794
Protein: E5a
Organism: Human papillomavirus type 6b
Function
Domain&Motif
| method | domain/motif name | position | length | description | graphical view |
|---|---|---|---|---|---|
| CDD | Papilloma_E5A | 3887-4159 | 273 | Papillomavirus E5A protein; Human papillomaviruses (HPVs) are epitheliotropic viruses, and their life cycle is intimately linked to the stratification and differentiation state of the host epithelial tissues. The kinetics of E5a protein expression during | |
| MOTIF_SCAN | 3917-3934 | 18 | |||
| MOTIF_SCAN | 4025-4105 | 81 | |||
| MOTIF_SCAN | 3887-4159 | 273 | |||
| MOTIF_SCAN | 3887-4159 | 273 | |||
| INTERPROSCAN | 3887-4147 | 261 | |||
| INTERPROSCAN | 3887-4159 | 273 | |||
| MOTIF_SEAR_IN_PROT | 3887-4159 | 273 | |||
| MOTIF_SEAR_IN_PROT | 3905-4096 | 192 | |||
| MOTIF_SEAR_IN_PROT | 3926-3997 | 72 | |||
| MOTIF_SEAR_IN_PROT | 3926-4144 | 219 | |||
| MOTIF_SEAR_IN_PROT | 3887-4132 | 246 | |||
| MOTIF_SEAR_IN_PROT | 3932-4078 | 147 | |||
| MOTIF_SEAR_IN_PROT | 3887-4159 | 273 | |||
| MOTIF_SEAR_IN_PROT | 3947-4153 | 207 | |||
| PROSITE_SCAN | 3917-3934 | 18 | |||
| PROSITE_SCAN | 4025-4105 | 81 | |||
| SBASE | 3887-4159 | 273 | |||
| TMPRED_SERVER | 3947-3997 | 51 | |||
| TMPRED_SERVER | 3947-4003 | 57 | |||
| TMPRED_SERVER | 4010-4075 | 66 | |||
| TMPRED_SERVER | 4040-4093 | 54 | |||
| TMPRED_SERVER | 4067-4117 | 51 |
Sequence
. . . . . . G:3946
atggaagtggtgcctgtacaaatagctgcaggaacaaccagcacattcatactgcctgtt C:60
M E V V P V Q I A A G T T S T F I L P V P:20
. . . . . . G:4006
ataattgcatttgttgtatgttttgttagcatcatacttattgtatggatatctgagttt C:60
I I A F V V C F V S I I L I V W I S E F P:20
. . . . . . G:4066
attgtgtacacatctgtgctagtactaacactgcttttatatttactattgtggctgcta C:60
I V Y T S V L V L T L L L Y L L L W L L P:20
. . . . . . G:4126
ttaacaacccccttgcaatttttcctactaactctacttgtgtgttactgtcccgcattg C:60
L T T P L Q F F L L T L L V C Y C P A L P:20
. . . G:4162
tatatacactactatattgttaccacacagcaatga C:36
Y I H Y Y I V T T Q Q P:11