HPV2 L2

Accession: H002790
Protein: L2
Organism: Human papillomavirus type 2

Function

Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.

Domain&Motif

method domain/motif name position length description graphical view
CDDLate_protein_L24412-57791368Late Protein L2;
MOTIF_SCAN5303-531412
MOTIF_SCAN4391-440212
MOTIF_SCAN4427-443812
MOTIF_SCAN5276-528712
MOTIF_SCAN5309-532012
MOTIF_SCAN4238-424912
MOTIF_SCAN4436-444712
MOTIF_SCAN4514-452512
MOTIF_SCAN4637-464812
MOTIF_SCAN4715-472612
MOTIF_SCAN4802-481312
MOTIF_SCAN5018-502912
MOTIF_SCAN5528-553912
MOTIF_SCAN5600-561112
MOTIF_SCAN5624-563512
MOTIF_SCAN4550-456718
MOTIF_SCAN4571-458818
MOTIF_SCAN4595-461218
MOTIF_SCAN4622-463918
MOTIF_SCAN5012-502918
MOTIF_SCAN4406-44149
MOTIF_SCAN4457-44659
MOTIF_SCAN4658-46669
MOTIF_SCAN5270-52789
MOTIF_SCAN5285-52939
MOTIF_SCAN5318-53269
MOTIF_SCAN5333-53419
MOTIF_SCAN5567-55759
MOTIF_SCAN4541-462484
MOTIF_SCAN4391-443545
MOTIF_SCAN4412-57791368
MOTIF_SCAN4412-57791368
INTERPROSCAN4418-57701353
MOTIF_SEAR_IN_PROT4412-57791368
MOTIF_SEAR_IN_PROT4418-5416999
MOTIF_SEAR_IN_PROT4418-57701353
PROSITE_SCAN4238-424912
PROSITE_SCAN4391-440212
PROSITE_SCAN4391-443545
PROSITE_SCAN4406-44149
PROSITE_SCAN4427-443812
PROSITE_SCAN4436-444712
PROSITE_SCAN4457-44659
PROSITE_SCAN4514-452512
PROSITE_SCAN4550-456718
PROSITE_SCAN4571-458818
PROSITE_SCAN4595-461218
PROSITE_SCAN4622-463918
PROSITE_SCAN4637-464812
PROSITE_SCAN4658-46669
PROSITE_SCAN4715-472612
PROSITE_SCAN4802-481312
PROSITE_SCAN5012-502918
PROSITE_SCAN5018-502912
PROSITE_SCAN5270-52789
PROSITE_SCAN5276-528712
PROSITE_SCAN5285-52939
PROSITE_SCAN5303-531412
PROSITE_SCAN5309-532012
PROSITE_SCAN5318-53269
PROSITE_SCAN5333-53419
PROSITE_SCAN5528-553912
PROSITE_SCAN5567-55759
PROSITE_SCAN5600-561112
PROSITE_SCAN5624-563512
SBASE4412-57791368
RADAR4442-4633192
RADAR4634-4816183
RADAR4817-5047231
RADAR5072-5209138
RADAR5210-5446237
RADAR5450-5683234
TMPRED_SERVER4328-438457
TMPRED_SERVER4331-438454
TMPRED_SERVER4538-458851
TMPRED_SERVER4544-460360
TMPRED_SERVER4838-489457
TMPRED_SERVER5528-557851
TMPRED_SERVER5555-560854
TMPRED_SERVER5666-571954
TMPRED_SERVER5672-573160

Sequence

         .         .         .         .         .         .     G:4294
atgtctgttggtgattcttatcctaatcgcctttttattgttgatgttttatgtccgttt     C:60
M S V G D S Y P N R L F I V D V L C P F      P:20


. . . . . .     G:4354
gttaaaccacacctaacacccccacttttttatattgttttgatacattttcattttgat     C:60
V K P H L T P P L F Y I V L I H F H F D      P:20


. . . . . .     G:4414
acatttgtgttttttttgtatttgctgcgttttaataaacgtgcaaccatgtctatacgt     C:60
T F V F F L Y L L R F N K R A T M S I R      P:20


. . . . . .     G:4474
gccaagcgtcgaaagcgcgcctcccccacagacctctatcgtacctgcaagcaggcaggt     C:60
A K R R K R A S P T D L Y R T C K Q A G      P:20


. . . . . .     G:4534
acctgccccccagacattatcccaagagtggaacagaacactttagcagataaaatcctt     C:60
T C P P D I I P R V E Q N T L A D K I L      P:20


. . . . . .     G:4594
aagtggggcagtttaggtgtgttttttgggggtctaggtataggcaccggcagcggcaca     C:60
K W G S L G V F F G G L G I G T G S G T      P:20


. . . . . .     G:4654
ggggggcgtactgggtacattcctgtaggttcgcgacccaccactgtagttgacattggt     C:60
G G R T G Y I P V G S R P T T V V D I G      P:20


. . . . . .     G:4714
ccaacgcccaggccgcctgttatcattgaacctgtgggggcctctgaaccctctattgtc     C:60
P T P R P P V I I E P V G A S E P S I V      P:20


. . . . . .     G:4774
actttggtggaggactctagcatcattaacgcaggagcgtcacatcccacctttactggt     C:60
T L V E D S S I I N A G A S H P T F T G      P:20


. . . . . .     G:4834
actggtggcttcgaagtgacaacctccaccgttacagaccccgccgtcttggatatcacc     C:60
T G G F E V T T S T V T D P A V L D I T      P:20


. . . . . .     G:4894
ccctcaggtaccagtgtgcaggtcagcagcagtagctttcttaacccactatacactgag     C:60
P S G T S V Q V S S S S F L N P L Y T E      P:20


. . . . . .     G:4954
ccagctattgtggaggctccccaaacaggggaagtatctggccatgtacttgttagtaca     C:60
P A I V E A P Q T G E V S G H V L V S T      P:20


. . . . . .     G:5014
gccacctcagggtctcatggctatgaggaaataccaatgcagacgtttgccacgtcgggg     C:60
A T S G S H G Y E E I P M Q T F A T S G      P:20


. . . . . .     G:5074
ggcagcggtacagagcctatcagtagcacacccctccctggcgtgcggagagttgccgga     C:60
G S G T E P I S S T P L P G V R R V A G      P:20


. . . . . .     G:5134
ccccgcctgtacagtagagccaatcagcaagtgcaagtcagggatcctgcgtttcttgca     C:60
P R L Y S R A N Q Q V Q V R D P A F L A      P:20


. . . . . .     G:5194
aggcctgctgatctagtaacatttgacaatcctgtgtatgacccagaggaaactataata     C:60
R P A D L V T F D N P V Y D P E E T I I      P:20


. . . . . .     G:5254
tttcagcatccagacttgcatgagccaccggatcctgattttttggacatagtggcgttg     C:60
F Q H P D L H E P P D P D F L D I V A L      P:20


. . . . . .     G:5314
catcgtcccgccctcacgtccagaaggggtactgtccgttttagtaggttgggacgcagg     C:60
H R P A L T S R R G T V R F S R L G R R      P:20


. . . . . .     G:5374
gctacactccgcacccgtagtggtaaacaaattggggcacgggtgcacttctatcatgat     C:60
A T L R T R S G K Q I G A R V H F Y H D      P:20


. . . . . .     G:5434
attagccctataggtactgaggagttggagatggagccactgttgcccccagcttctact     C:60
I S P I G T E E L E M E P L L P P A S T      P:20


. . . . . .     G:5494
gataacacagatatgttatatgatgtttatgctgattcggatgtccttcagccattgctt     C:60
D N T D M L Y D V Y A D S D V L Q P L L      P:20


. . . . . .     G:5554
gatgagttacccgccgcccctcgcggttcactctctctggctgacactgctgtgtctgcc     C:60
D E L P A A P R G S L S L A D T A V S A      P:20


. . . . . .     G:5614
acctccgcatctacactacgggggtccactactgtccctttatcaagtggtattgatgtg     C:60
T S A S T L R G S T T V P L S S G I D V      P:20


. . . . . .     G:5674
cctgtgtacaccggtcctgacattgaaccacccaatgttcctggcatgggacctctgatt     C:60
P V Y T G P D I E P P N V P G M G P L I      P:20


. . . . . .     G:5734
cctgtggctccatccttaccatcgtctgtgtacatatttgggggagattattatttgatg     C:60
P V A P S L P S S V Y I F G G D Y Y L M      P:20


. . . . . .     G:5794
ccaagttatgtcttgtggcctaaacgacgtaaacgtgtccactatttctttgcagatggc     C:60
P S Y V L W P K R R K R V H Y F F A D G      P:20


.      G:5809
tttgtggcggcctaa      C:15
F V A A      P:4