HPV2 E6

Accession: H002787
Protein: E6
Organism: Human papillomavirus type 2

Function

It is an oncogenic protein which causes transformation of host cell by binding to p53 tumour suppressor protein. For binding, it requires E6-associated protein (E6-AP) which is involved in the ubiquitin ligase pathway. E6-AP binds ubiquitin to the p53 pro

Domain&Motif

method domain/motif name position length description graphical view
CDDE6191-520330Early Protein (E6);
MOTIF_SCAN482-49312
MOTIF_SCAN215-22612
MOTIF_SCAN434-44512
MOTIF_SCAN533-54412
MOTIF_SCAN521-53818
MOTIF_SCAN488-4969
MOTIF_SCAN191-520330
MOTIF_SCAN191-520330
INTERPROSCAN191-520330
MOTIF_SEAR_IN_PROT191-520330
MOTIF_SEAR_IN_PROT131-532402
MOTIF_SEAR_IN_PROT128-520393
MOTIF_SEAR_IN_PROT152-298147
MOTIF_SEAR_IN_PROT386-47287
MOTIF_SEAR_IN_PROT365-490126
MOTIF_SEAR_IN_PROT179-301123
MOTIF_SEAR_IN_PROT191-520330
MOTIF_SEAR_IN_PROT389-541153
MOTIF_SEAR_IN_PROT407-46054
PROSITE_SCAN215-22612
PROSITE_SCAN434-44512
PROSITE_SCAN482-49312
PROSITE_SCAN488-4969
PROSITE_SCAN521-53818
PROSITE_SCAN533-54412
SBASE95-17581
SBASE191-520330
TMPRED_SERVER260-31354

Sequence

         .         .         .         .         .         .     G:148
atgcacacaagggcagggatgtctgaggagaatccatgccctaggaacatctttttgctt     C:60
M H T R A G M S E E N P C P R N I F L L      P:20


. . . . . .     G:208
tgcaaagagtatggtttggagctagaggatttgcgattgctctgtgtatggtgcaaacgg     C:60
C K E Y G L E L E D L R L L C V W C K R      P:20


. . . . . .     G:268
ccgttatcagaggctgacatatgggcatttgcaataaaagaactgtttgtagtgtggaga     C:60
P L S E A D I W A F A I K E L F V V W R      P:20


. . . . . .     G:328
aagggcttcccatttggagcctgcggaaaatgcctgattgcagcaggaaaacttagacaa     C:60
K G F P F G A C G K C L I A A G K L R Q      P:20


. . . . . .     G:388
tacagacattggcattactcatgctacggagacacagtggagactgagacaggaataccc     C:60
Y R H W H Y S C Y G D T V E T E T G I P      P:20


. . . . . .     G:448
atacctcagctgtttatgagatgctatatttgccataagcccctgagctgggaggagaag     C:60
I P Q L F M R C Y I C H K P L S W E E K      P:20


. . . . . .     G:508
gaggcattactagttggaaacaagcgtttccacaacatatcaggccggtggacgggacat     C:60
E A L L V G N K R F H N I S G R W T G H      P:20


     G:568
tgcatgaactgcgggtcatcatgcacggcaaccgacccagcctcaaggacattacactaa     C:0
C M N C G S S C T A T D P A S R T L H      P:19