HPV59 L2

Accession: H001293
Uniprot: Q81970
Protein: L2
Organism: Human papillomavirus type 59

Function

Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.

Domain&Motif

method domain/motif name position length description graphical view
CDDLate_protein_L24273-55951323Late Protein L2;
CDDPHA027774273-5238966major capsid L1 protein; Provisional
MOTIF_SCAN5392-540312
MOTIF_SCAN4258-426912
MOTIF_SCAN5095-510612
MOTIF_SCAN4267-427812
MOTIF_SCAN4345-435612
MOTIF_SCAN4468-447912
MOTIF_SCAN4543-455412
MOTIF_SCAN4606-461712
MOTIF_SCAN4723-473412
MOTIF_SCAN4840-485112
MOTIF_SCAN4936-494712
MOTIF_SCAN5413-542412
MOTIF_SCAN5437-544812
MOTIF_SCAN4303-432018
MOTIF_SCAN4339-435618
MOTIF_SCAN4381-439818
MOTIF_SCAN4402-441918
MOTIF_SCAN4426-444318
MOTIF_SCAN4453-447018
MOTIF_SCAN5125-514218
MOTIF_SCAN4237-42459
MOTIF_SCAN4288-42969
MOTIF_SCAN4876-48849
MOTIF_SCAN5089-50979
MOTIF_SCAN5104-51129
MOTIF_SCAN5152-51609
MOTIF_SCAN4381-445878
MOTIF_SCAN4243-55951353
MOTIF_SCAN4243-55951353
INTERPROSCAN4252-54121161
MOTIF_SEAR_IN_PROT4243-55951353
MOTIF_SEAR_IN_PROT4252-5238987
MOTIF_SEAR_IN_PROT4480-4752273
MOTIF_SEAR_IN_PROT4798-4947150
MOTIF_SEAR_IN_PROT4447-4884438
MOTIF_SEAR_IN_PROT4252-54121161
PROSITE_SCAN4237-42459
PROSITE_SCAN4258-426912
PROSITE_SCAN4267-427812
PROSITE_SCAN4288-42969
PROSITE_SCAN4303-432018
PROSITE_SCAN4339-435618
PROSITE_SCAN4345-435612
PROSITE_SCAN4381-439818
PROSITE_SCAN4402-441918
PROSITE_SCAN4426-444318
PROSITE_SCAN4453-447018
PROSITE_SCAN4468-447912
PROSITE_SCAN4543-455412
PROSITE_SCAN4606-461712
PROSITE_SCAN4723-473412
PROSITE_SCAN4840-485112
PROSITE_SCAN4876-48849
PROSITE_SCAN4936-494712
PROSITE_SCAN5089-50979
PROSITE_SCAN5095-510612
PROSITE_SCAN5104-51129
PROSITE_SCAN5125-514218
PROSITE_SCAN5152-51609
PROSITE_SCAN5392-540312
PROSITE_SCAN5413-542412
PROSITE_SCAN5437-544812
SBASE4273-55951323
RADAR4846-5010165
RADAR5014-5223210
RADAR5227-5427201
RADAR4525-462096
RADAR4636-4737102
RADAR4753-484593
RADAR5428-548760
RADAR5497-555963
TMPRED_SERVER4396-445257
TMPRED_SERVER4396-445863
TMPRED_SERVER4573-463260
TMPRED_SERVER4627-468963
TMPRED_SERVER4693-474957
TMPRED_SERVER5392-544857
TMPRED_SERVER5398-544851
TMPRED_SERVER5548-560760

Sequence

         .         .         .         .         .         .     G:4290
atggtttcccatcgtgctgctcgtcgtaaacgtgcctcagcaacagacttatataaaact     C:60
M V S H R A A R R K R A S A T D L Y K T      P:20


. . . . . .     G:4350
tgcaagcaggcaggtacatgcccttctgatgttattaataaagttgaaggtacaacttta     C:60
C K Q A G T C P S D V I N K V E G T T L      P:20


. . . . . .     G:4410
gctgataaaatattgcagtggaccagcctaggaatatttttaggtggactaggtattggt     C:60
A D K I L Q W T S L G I F L G G L G I G      P:20


. . . . . .     G:4470
actggatctggtaccggtggcagaacagggtacatacctttaggggggcgtacaaacact     C:60
T G S G T G G R T G Y I P L G G R T N T      P:20


. . . . . .     G:4530
atagtagatgtatcgcctgctaaaccaccagtagttattgaacctgttggacctacagat     C:60
I V D V S P A K P P V V I E P V G P T D      P:20


. . . . . .     G:4590
ccatctatagttacattagttgaggattctagtgttataacatctggagcccctgcccca     C:60
P S I V T L V E D S S V I T S G A P A P      P:20


. . . . . .     G:4650
acatttacaggtacttcaggatttgaaatatctacctctagtacaacaacaccagctgtt     C:60
T F T G T S G F E I S T S S T T T P A V      P:20


. . . . . .     G:4710
ttggatataaccccaacctcttctgttcaaattagtagctctagttttataaatcctgca     C:60
L D I T P T S S V Q I S S S S F I N P A      P:20


. . . . . .     G:4770
tttacagacccttctgtcattgaggttccccaaacaggtgaaatttctggtaatatatta     C:60
F T D P S V I E V P Q T G E I S G N I L      P:20


. . . . . .     G:4830
attagtacccctacctctggtgcacatggctatgaagaaattccaatgcaaacgtttgct     C:60
I S T P T S G A H G Y E E I P M Q T F A      P:20


. . . . . .     G:4890
acggaaggtactggtttggaacccattagcagtacccccaatccaacagtacgtcgtgtg     C:60
T E G T G L E P I S S T P N P T V R R V      P:20


. . . . . .     G:4950
gctggacctagattgtacagtagggctaatcaacaagttcgggtgtctaacgctgacttt     C:60
A G P R L Y S R A N Q Q V R V S N A D F      P:20


. . . . . .     G:5010
ttaacacgtccatccacatttgttacatatgataaccctgcttatgatccaattgatact     C:60
L T R P S T F V T Y D N P A Y D P I D T      P:20


. . . . . .     G:5070
acattaacttttgacccctcatcagaggttccagacccggactttatggatatagttcgt     C:60
T L T F D P S S E V P D P D F M D I V R      P:20


. . . . . .     G:5130
ttgcataggcctgcattaacatccagacgcagcactgtaaggtttagtaggctaggacaa     C:60
L H R P A L T S R R S T V R F S R L G Q      P:20


. . . . . .     G:5190
cgggcaaccatgtttacccgtagtggtaaacaaattggggcccgtgtacatttttatcat     C:60
R A T M F T R S G K Q I G A R V H F Y H      P:20


. . . . . .     G:5250
gatataagccctataccacatgctgaagatattgaattgcaacctcttgtttcttcccag     C:60
D I S P I P H A E D I E L Q P L V S S Q      P:20


. . . . . .     G:5310
gctgctactgatgatatatatgatatatatgcagatattacagatgaagcacctactagt     C:60
A A T D D I Y D I Y A D I T D E A P T S      P:20


. . . . . .     G:5370
actgccaacactgcatttacaattcctaaatcttcttttcaaagtttgtcattaacacgg     C:60
T A N T A F T I P K S S F Q S L S L T R      P:20


. . . . . .     G:5430
tcggcatctagcaccttttcaaatgtaactgttcctttggctactgcctgggatgttcct     C:60
S A S S T F S N V T V P L A T A W D V P      P:20


. . . . . .     G:5490
gtaaatacaggacccgatatagttttacctaatactaatattgttgaacccacttattct     C:60
V N T G P D I V L P N T N I V E P T Y S      P:20


. . . . . .     G:5550
actacaccctttaccaccatacagtctattaatatagaaggcacaaattattttttatgg     C:60
T T P F T T I Q S I N I E G T N Y F L W      P:20


. . . . . .     G:5610
cctatatattattttttacctcgtaaacgtaaacgtgttccctatttttttacagatggc     C:60
P I Y Y F L P R K R K R V P Y F F T D G      P:20


.      G:5625
tctatggcgttctag      C:15
S M A F      P:4