HPV59 L1

Accession: H000507
Uniprot: Q81971
Protein: L1
Organism: Human papillomavirus type 59

Function

Major capsid protein. It can form virus-like particles. It forms the pentameric assembly unit of the viral shell.

Domain&Motif

method domain/motif name position length description graphical view
CDDPHA027785606-70451440major capsid L1 protein; Provisional
CDDLate_protein_L15612-70511440L1 (late) protein;
MOTIF_SCAN6998-700912
MOTIF_SCAN6041-605212
MOTIF_SCAN6251-626212
MOTIF_SCAN6389-640012
MOTIF_SCAN6626-663712
MOTIF_SCAN6791-680212
MOTIF_SCAN7109-712012
MOTIF_SCAN5672-568312
MOTIF_SCAN5870-588112
MOTIF_SCAN6011-602212
MOTIF_SCAN6182-619312
MOTIF_SCAN6401-641212
MOTIF_SCAN6599-661012
MOTIF_SCAN6683-669412
MOTIF_SCAN6797-680812
MOTIF_SCAN6845-685612
MOTIF_SCAN5855-587218
MOTIF_SCAN5915-593218
MOTIF_SCAN5933-595018
MOTIF_SCAN6083-610018
MOTIF_SCAN6494-651118
MOTIF_SCAN6557-657418
MOTIF_SCAN5720-57289
MOTIF_SCAN5888-58969
MOTIF_SCAN6611-66199
MOTIF_SCAN6683-66919
MOTIF_SCAN6857-68659
MOTIF_SCAN7091-70999
MOTIF_SCAN7118-71269
MOTIF_SCAN5618-564124
MOTIF_SCAN7058-710851
MOTIF_SCAN7058-711154
MOTIF_SCAN5606-71171512
MOTIF_SCAN5606-71171512
INTERPROSCAN5654-571663
INTERPROSCAN5789-585769
INTERPROSCAN5894-597178
INTERPROSCAN6059-611254
INTERPROSCAN6152-622372
INTERPROSCAN6254-631663
INTERPROSCAN6329-640072
INTERPROSCAN6482-655069
INTERPROSCAN6554-661966
INTERPROSCAN6695-674854
INTERPROSCAN6944-701572
INTERPROSCAN5663-70271365
INTERPROSCAN5657-70271371
INTERPROSCAN5615-71021488
MOTIF_SEAR_IN_PROT5606-71171512
MOTIF_SEAR_IN_PROT5612-71111500
MOTIF_SEAR_IN_PROT5711-579181
MOTIF_SEAR_IN_PROT5615-71021488
PROSITE_SCAN5618-564124
PROSITE_SCAN5672-568312
PROSITE_SCAN5720-57289
PROSITE_SCAN5855-587218
PROSITE_SCAN5870-588112
PROSITE_SCAN5888-58969
PROSITE_SCAN5915-593218
PROSITE_SCAN5933-595018
PROSITE_SCAN6011-602212
PROSITE_SCAN6041-605212
PROSITE_SCAN6083-610018
PROSITE_SCAN6182-619312
PROSITE_SCAN6251-626212
PROSITE_SCAN6389-640012
PROSITE_SCAN6401-641212
PROSITE_SCAN6494-651118
PROSITE_SCAN6557-657418
PROSITE_SCAN6599-661012
PROSITE_SCAN6611-66199
PROSITE_SCAN6626-663712
PROSITE_SCAN6683-66919
PROSITE_SCAN6683-669412
PROSITE_SCAN6791-680212
PROSITE_SCAN6797-680812
PROSITE_SCAN6845-685612
PROSITE_SCAN6857-68659
PROSITE_SCAN6998-700912
PROSITE_SCAN7091-70999
PROSITE_SCAN7109-712012
PROSITE_SCAN7118-71269
SBASE5606-70511446
RADAR5630-5782153
RADAR5846-6004159
TMPRED_SERVER6659-671860
TMPRED_SERVER6662-671857
TMPRED_SERVER6758-680851

Sequence

         .         .         .         .         .         .     G:5665
atggctctatggcgttctagtgacaacaaggtgtatctacctccaccttcggtagctaag     C:60
M A L W R S S D N K V Y L P P P S V A K      P:20


. . . . . .     G:5725
gttgtcagcactgatgagtatgtcacccgtaccagtattttctaccacgcaggcagttcc     C:60
V V S T D E Y V T R T S I F Y H A G S S      P:20


. . . . . .     G:5785
agacttcttacagttggacatccatattttaaagtacctaaaggtggtaatggtagacag     C:60
R L L T V G H P Y F K V P K G G N G R Q      P:20


. . . . . .     G:5845
gatgttcctaaggtgtctgcatatcaatacagagtatttagggttaagttacctgatccc     C:60
D V P K V S A Y Q Y R V F R V K L P D P      P:20


. . . . . .     G:5905
aataaatttggccttccagataacacagtatatgatcctaactctcaacgcttggtctgg     C:60
N K F G L P D N T V Y D P N S Q R L V W      P:20


. . . . . .     G:5965
gcctgtgtaggtgttgaaatcggtcggggccaacctttaggggtaggactcagtggtcat     C:60
A C V G V E I G R G Q P L G V G L S G H      P:20


. . . . . .     G:6025
ccattatataataaattggatgacactgaaaactctcatgtagcatctgctgttgatacc     C:60
P L Y N K L D D T E N S H V A S A V D T      P:20


. . . . . .     G:6085
aaagatacacgtgataatgtatctgtggattataaacaaactcagctgtgtattattggc     C:60
K D T R D N V S V D Y K Q T Q L C I I G      P:20


. . . . . .     G:6145
tgtgtacctgccattggagaacactggacaaagggcactgcttgtaagcctactactgtg     C:60
C V P A I G E H W T K G T A C K P T T V      P:20


. . . . . .     G:6205
gttcagggcgattgtcctccactagaattaataaatacaccaattgaagatggtgatatg     C:60
V Q G D C P P L E L I N T P I E D G D M      P:20


. . . . . .     G:6265
gtagacacaggatatggggctatggactttaaattgttgcaggataacaaaagtgaagta     C:60
V D T G Y G A M D F K L L Q D N K S E V      P:20


. . . . . .     G:6325
ccattggatatttgtcagtctatttgtaaatatcctgattatttacaaatgtcagcagat     C:60
P L D I C Q S I C K Y P D Y L Q M S A D      P:20


. . . . . .     G:6385
gcttatggagacagtatgtttttttgtttaaggcgagaacaggtttttgccagacatttt     C:60
A Y G D S M F F C L R R E Q V F A R H F      P:20


. . . . . .     G:6445
tggaatagatctggtactatgggtgatcaacttcctgaatcactatatattaaaggtact     C:60
W N R S G T M G D Q L P E S L Y I K G T      P:20


. . . . . .     G:6505
gacatacgtgccaacccaggcagttatttatattccccttccccaagtgggtctgtggtt     C:60
D I R A N P G S Y L Y S P S P S G S V V      P:20


. . . . . .     G:6565
acttctgattcacaattatttaataaaccatattggctgcacaaggctcagggtttaaac     C:60
T S D S Q L F N K P Y W L H K A Q G L N      P:20


. . . . . .     G:6625
aatggtatatgttggcacaatcaattgtttttaacagttgtagatactactcgcagcacc     C:60
N G I C W H N Q L F L T V V D T T R S T      P:20


. . . . . .     G:6685
aatctttctgtgtgtgcttctactacttcttctattcctaatgtatacacacctaccagt     C:60
N L S V C A S T T S S I P N V Y T P T S      P:20


. . . . . .     G:6745
tttaaagaatatgccagacatgtggaggaatttgatttgcagtttatatttcaactgtgt     C:60
F K E Y A R H V E E F D L Q F I F Q L C      P:20


. . . . . .     G:6805
aaaataacattaactacagaggtaatgtcatacattcataatatgaataccactattttg     C:60
K I T L T T E V M S Y I H N M N T T I L      P:20


. . . . . .     G:6865
gaggattggaattttggtgttacaccacctcctactgctagtttagttgacacataccgt     C:60
E D W N F G V T P P P T A S L V D T Y R      P:20


. . . . . .     G:6925
tttgttcaatctgctgctgtaacttgtcaaaaggacaccgcaccgccagttaaacaggac     C:60
F V Q S A A V T C Q K D T A P P V K Q D      P:20


. . . . . .     G:6985
ccttatgacaaactaaagttttggcctgtagatcttaaggaaaggttttctgcagatctt     C:60
P Y D K L K F W P V D L K E R F S A D L      P:20


. . . . . .     G:7045
gatcagtttcctttgggacgtaaatttttattgcaattaggagctagacctaagcccact     C:60
D Q F P L G R K F L L Q L G A R P K P T      P:20


. . . . . .     G:7105
ataggcccacgcaaacgtgcagcgcctgcccctacctctaccccatcaccaaaacgtgtt     C:60
I G P R K R A A P A P T S T P S P K R V      P:20


. .      G:7132
aagcgtcgcaagtcttccagaaaatag      C:27
K R R K S S R K      P:8