HPV58 L2
Accession: H000158
Uniprot: P26538
Protein: L2
Organism: Human papillomavirus type 58
Function
Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.
Domain&Motif
| method | domain/motif name | position | length | description | graphical view |
|---|---|---|---|---|---|
| CDD | Late_protein_L2 | 4256-5632 | 1377 | Late Protein L2; | |
| CDD | PHA02777 | 4265-5623 | 1359 | major capsid L1 protein; Provisional | |
| MOTIF_SCAN | 4670-4681 | 12 | |||
| MOTIF_SCAN | 4868-4879 | 12 | |||
| MOTIF_SCAN | 5291-5302 | 12 | |||
| MOTIF_SCAN | 5420-5431 | 12 | |||
| MOTIF_SCAN | 4253-4264 | 12 | |||
| MOTIF_SCAN | 4271-4282 | 12 | |||
| MOTIF_SCAN | 5126-5137 | 12 | |||
| MOTIF_SCAN | 4358-4369 | 12 | |||
| MOTIF_SCAN | 4559-4570 | 12 | |||
| MOTIF_SCAN | 4577-4588 | 12 | |||
| MOTIF_SCAN | 4622-4633 | 12 | |||
| MOTIF_SCAN | 4640-4651 | 12 | |||
| MOTIF_SCAN | 4679-4690 | 12 | |||
| MOTIF_SCAN | 4727-4738 | 12 | |||
| MOTIF_SCAN | 5312-5323 | 12 | |||
| MOTIF_SCAN | 5357-5368 | 12 | |||
| MOTIF_SCAN | 5441-5452 | 12 | |||
| MOTIF_SCAN | 4352-4369 | 18 | |||
| MOTIF_SCAN | 4394-4411 | 18 | |||
| MOTIF_SCAN | 4415-4432 | 18 | |||
| MOTIF_SCAN | 4439-4456 | 18 | |||
| MOTIF_SCAN | 4865-4882 | 18 | |||
| MOTIF_SCAN | 5156-5173 | 18 | |||
| MOTIF_SCAN | 4259-4267 | 9 | |||
| MOTIF_SCAN | 4301-4309 | 9 | |||
| MOTIF_SCAN | 5120-5128 | 9 | |||
| MOTIF_SCAN | 5135-5143 | 9 | |||
| MOTIF_SCAN | 5168-5176 | 9 | |||
| MOTIF_SCAN | 5183-5191 | 9 | |||
| MOTIF_SCAN | 5405-5413 | 9 | |||
| MOTIF_SCAN | 5219-5284 | 66 | |||
| MOTIF_SCAN | 4385-4468 | 84 | |||
| MOTIF_SCAN | 4256-5632 | 1377 | |||
| MOTIF_SCAN | 4256-5632 | 1377 | |||
| INTERPROSCAN | 4262-5623 | 1362 | |||
| MOTIF_SEAR_IN_PROT | 4256-5632 | 1377 | |||
| MOTIF_SEAR_IN_PROT | 4265-5623 | 1359 | |||
| MOTIF_SEAR_IN_PROT | 4376-4471 | 96 | |||
| MOTIF_SEAR_IN_PROT | 4262-5623 | 1362 | |||
| PROSITE_SCAN | 4253-4264 | 12 | |||
| PROSITE_SCAN | 4259-4267 | 9 | |||
| PROSITE_SCAN | 4271-4282 | 12 | |||
| PROSITE_SCAN | 4301-4309 | 9 | |||
| PROSITE_SCAN | 4352-4369 | 18 | |||
| PROSITE_SCAN | 4358-4369 | 12 | |||
| PROSITE_SCAN | 4394-4411 | 18 | |||
| PROSITE_SCAN | 4415-4432 | 18 | |||
| PROSITE_SCAN | 4439-4456 | 18 | |||
| PROSITE_SCAN | 4559-4570 | 12 | |||
| PROSITE_SCAN | 4577-4588 | 12 | |||
| PROSITE_SCAN | 4622-4633 | 12 | |||
| PROSITE_SCAN | 4640-4651 | 12 | |||
| PROSITE_SCAN | 4670-4681 | 12 | |||
| PROSITE_SCAN | 4679-4690 | 12 | |||
| PROSITE_SCAN | 4727-4738 | 12 | |||
| PROSITE_SCAN | 4865-4882 | 18 | |||
| PROSITE_SCAN | 4868-4879 | 12 | |||
| PROSITE_SCAN | 5120-5128 | 9 | |||
| PROSITE_SCAN | 5126-5137 | 12 | |||
| PROSITE_SCAN | 5135-5143 | 9 | |||
| PROSITE_SCAN | 5156-5173 | 18 | |||
| PROSITE_SCAN | 5168-5176 | 9 | |||
| PROSITE_SCAN | 5183-5191 | 9 | |||
| PROSITE_SCAN | 5291-5302 | 12 | |||
| PROSITE_SCAN | 5312-5323 | 12 | |||
| PROSITE_SCAN | 5357-5368 | 12 | |||
| PROSITE_SCAN | 5405-5413 | 9 | |||
| PROSITE_SCAN | 5420-5431 | 12 | |||
| PROSITE_SCAN | 5441-5452 | 12 | |||
| SBASE | 4256-5632 | 1377 | |||
| RADAR | 4526-4630 | 105 | |||
| RADAR | 4649-4744 | 96 | |||
| RADAR | 5354-5449 | 96 | |||
| RADAR | 4871-4951 | 81 | |||
| RADAR | 4958-5074 | 117 | |||
| RADAR | 5075-5197 | 123 | |||
| RADAR | 4757-4852 | 96 | |||
| RADAR | 5474-5563 | 90 | |||
| TMPRED_SERVER | 4376-4432 | 57 | |||
| TMPRED_SERVER | 4388-4444 | 57 | |||
| TMPRED_SERVER | 5495-5551 | 57 | |||
| TMPRED_SERVER | 5525-5587 | 63 | |||
| TMPRED_SERVER | 5546-5596 | 51 | |||
| UNIPROTKB | 4244-4279 | 36 | |||
| UNIPROTKB | 5600-5626 | 27 |
Sequence
. . . . . . G:4303
atgagacacaaacggtctacaaggcgcaagcgtgcatctgctacacaactttaccaaaca C:60
M R H K R S T R R K R A S A T Q L Y Q T P:20
. . . . . . G:4363
tgcaaggcctcaggcacctgcccacctgatgttatacccaaagttgaaggcactactata C:60
C K A S G T C P P D V I P K V E G T T I P:20
. . . . . . G:4423
gcagatcaaatattacgatatggtagcttaggggtgttttttggaggtttaggcattggt C:60
A D Q I L R Y G S L G V F F G G L G I G P:20
. . . . . . G:4483
acagggtcgggtacaggtggcaggactggatatgtgccccttggtagtaccccaccgtct C:60
T G S G T G G R T G Y V P L G S T P P S P:20
. . . . . . G:4543
gaggctatacctttacagcccatacgtcccccagttaccgttgatactgtggggcctttg C:60
E A I P L Q P I R P P V T V D T V G P L P:20
. . . . . . G:4603
gattcttctattgtatctttaatagaggaatctagttttatagacgccggtgcaccagcc C:60
D S S I V S L I E E S S F I D A G A P A P:20
. . . . . . G:4663
ccatcaattcccactccatctggttttgatattaccacctctgcagatactacacctgca C:60
P S I P T P S G F D I T T S A D T T P A P:20
. . . . . . G:4723
atacttaatgtttcctctattggagaatcatctatacaaactgtttctacacatttaaat C:60
I L N V S S I G E S S I Q T V S T H L N P:20
. . . . . . G:4783
ccctcctttactgagccatccgtactccgccctcctgcacctgcagaggcctctggacat C:60
P S F T E P S V L R P P A P A E A S G H P:20
. . . . . . G:4843
ttaatattttcctctcctactgttagcacacatagttatgaaaacataccaatggatacc C:60
L I F S S P T V S T H S Y E N I P M D T P:20
. . . . . . G:4903
tttgttatttctactgacagtggcaatgtcacgtctagcacacccattccagggtctcgc C:60
F V I S T D S G N V T S S T P I P G S R P:20
. . . . . . G:4963
cctgtggcacgccttggtttatacagtcgcaacacccaacaagttaaggttgttgaccct C:60
P V A R L G L Y S R N T Q Q V K V V D P P:20
. . . . . . G:5023
gcttttttaacatctcctcatagacttgtaacatatgataatccagcatttgaaggcttt C:60
A F L T S P H R L V T Y D N P A F E G F P:20
. . . . . . G:5083
aaccctgaggacacattgcagtttcaacatagtgacatatcgcctgctcctgatcctgat C:60
N P E D T L Q F Q H S D I S P A P D P D P:20
. . . . . . G:5143
tttctagatattgttgcattacacagacctgcattaacctctcgcaggggtactgtacgt C:60
F L D I V A L H R P A L T S R R G T V R P:20
. . . . . . G:5203
tatagtagggttgggcaaaaggctacacttcgtactcgcagtggaaagcaaataggggct C:60
Y S R V G Q K A T L R T R S G K Q I G A P:20
. . . . . . G:5263
aaagtacattactaccaagacttaagtcccatacagcctgtccaggaacaggtacaacag C:60
K V H Y Y Q D L S P I Q P V Q E Q V Q Q P:20
. . . . . . G:5323
cagcaacaatttgaattacaatctttaaatacttctgtttctccctatagtattaatgat C:60
Q Q Q F E L Q S L N T S V S P Y S I N D P:20
. . . . . . G:5383
ggactttatgatatttatgctgacgatgctgatactatacatgattttcagagtcctctg C:60
G L Y D I Y A D D A D T I H D F Q S P L P:20
. . . . . . G:5443
cactcacatacgtcctttgccaccacacgtaccagtaatgtgtccataccattaaatact C:60
H S H T S F A T T R T S N V S I P L N T P:20
. . . . . . G:5503
ggatttgacactcctcttgtgtcattggaacctggtccagacattgcatcttctgtaaca C:60
G F D T P L V S L E P G P D I A S S V T P:20
. . . . . . G:5563
tctatgtctagtccatttattcctatatctccactaactccttttaataccataattgtg C:60
S M S S P F I P I S P L T P F N T I I V P:20
. . . . . . G:5623
gatggtgctgattttatgttgcaccctagctattttattttgcgtcgcagacgtaaacgt C:60
D G A D F M L H P S Y F I L R R R R K R P:20
. . . G:5662
tttccatatttttttgcagatgtccgtgtggcggcctag C:39
F P Y F F A D V R V A A P:12
