HPV52 L2

Accession: H000153
Uniprot: P36763
Protein: L2
Organism: Human papillomavirus type 52

Function

Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.

Domain&Motif

method domain/motif name position length description graphical view
CDDLate_protein_L24274-56051332Late Protein L2;
CDDPHA027774283-55931311major capsid L1 protein; Provisional
MOTIF_SCAN4688-469912
MOTIF_SCAN5405-541612
MOTIF_SCAN4271-428212
MOTIF_SCAN4289-430012
MOTIF_SCAN5144-515512
MOTIF_SCAN4376-438712
MOTIF_SCAN4577-458812
MOTIF_SCAN4595-460612
MOTIF_SCAN4640-465112
MOTIF_SCAN4697-470812
MOTIF_SCAN4745-475612
MOTIF_SCAN4835-484612
MOTIF_SCAN4868-487912
MOTIF_SCAN5321-533212
MOTIF_SCAN5432-544312
MOTIF_SCAN5474-548512
MOTIF_SCAN4370-438718
MOTIF_SCAN4412-442918
MOTIF_SCAN4433-445018
MOTIF_SCAN4457-447418
MOTIF_SCAN4913-493018
MOTIF_SCAN5174-519118
MOTIF_SCAN4277-42859
MOTIF_SCAN4319-43279
MOTIF_SCAN4484-44929
MOTIF_SCAN4520-45289
MOTIF_SCAN4925-49339
MOTIF_SCAN5138-51469
MOTIF_SCAN5153-51619
MOTIF_SCAN5186-51949
MOTIF_SCAN5201-52099
MOTIF_SCAN4403-447169
MOTIF_SCAN4262-429736
MOTIF_SCAN4274-56321359
MOTIF_SCAN4274-56321359
INTERPROSCAN4283-56231341
MOTIF_SEAR_IN_PROT4274-56321359
MOTIF_SEAR_IN_PROT4283-56231341
MOTIF_SEAR_IN_PROT4283-56231341
PROSITE_SCAN4271-428212
PROSITE_SCAN4277-42859
PROSITE_SCAN4289-430012
PROSITE_SCAN4319-43279
PROSITE_SCAN4370-438718
PROSITE_SCAN4376-438712
PROSITE_SCAN4412-442918
PROSITE_SCAN4433-445018
PROSITE_SCAN4457-447418
PROSITE_SCAN4484-44929
PROSITE_SCAN4520-45289
PROSITE_SCAN4577-458812
PROSITE_SCAN4595-460612
PROSITE_SCAN4640-465112
PROSITE_SCAN4688-469912
PROSITE_SCAN4697-470812
PROSITE_SCAN4745-475612
PROSITE_SCAN4835-484612
PROSITE_SCAN4868-487912
PROSITE_SCAN4913-493018
PROSITE_SCAN4925-49339
PROSITE_SCAN5138-51469
PROSITE_SCAN5144-515512
PROSITE_SCAN5153-51619
PROSITE_SCAN5174-519118
PROSITE_SCAN5186-51949
PROSITE_SCAN5201-52099
PROSITE_SCAN5321-533212
PROSITE_SCAN5405-541612
PROSITE_SCAN5432-544312
PROSITE_SCAN5474-548512
SBASE4274-56321359
RADAR4472-4714243
RADAR4715-4888174
RADAR4889-4996108
RADAR5384-5572189
TMPRED_SERVER4406-446257
TMPRED_SERVER4406-446560
TMPRED_SERVER5528-558760
TMPRED_SERVER5549-560860
UNIPROTKB5600-562627

Sequence

         .         .         .         .         .         .     G:4321
atgagatacagacggtctacacggcacaaacgtgcttctgcaacacagctatatcaaaca     C:60
M R Y R R S T R H K R A S A T Q L Y Q T      P:20


. . . . . .     G:4381
tgcaaagcctctggcacctgcccccccgatgttattcctaaagtggaaggcacaactatt     C:60
C K A S G T C P P D V I P K V E G T T I      P:20


. . . . . .     G:4441
gcagatcaacttttaaaatatggcagcctaggggtgttttttggaggtttgggtataggt     C:60
A D Q L L K Y G S L G V F F G G L G I G      P:20


. . . . . .     G:4501
acaggtgcaggctctggtggtagggcaggctatgtgccattgtccactcgtcctcccact     C:60
T G A G S G G R A G Y V P L S T R P P T      P:20


. . . . . .     G:4561
agtagtattaccacgtccaccattcgtccccctgtaactgtagaacccattggtccctta     C:60
S S I T T S T I R P P V T V E P I G P L      P:20


. . . . . .     G:4621
gaaccatctatagtttctatgatagaagaaacaacatttattgagtctggcgcacctgct     C:60
E P S I V S M I E E T T F I E S G A P A      P:20


. . . . . .     G:4681
ccatctattccatcagcaacagggtttgatgttacaacatctgcaaataatactcctgca     C:60
P S I P S A T G F D V T T S A N N T P A      P:20


. . . . . .     G:4741
ataattaatgtaacatctataggtgaatcatctgtacaatcagtttctacacatttaaat     C:60
I I N V T S I G E S S V Q S V S T H L N      P:20


. . . . . .     G:4801
cctacattcactgaaccatctataatacagcccccggcacctgcagaagcatctggtcat     C:60
P T F T E P S I I Q P P A P A E A S G H      P:20


. . . . . .     G:4861
gtattgttttctagtccaactattagtacacacacctatgaagaaatccctatggataca     C:60
V L F S S P T I S T H T Y E E I P M D T      P:20


. . . . . .     G:4921
tttgttacctctactgacagcagcagtgtaacaagtagtacacctattccagggtctcgc     C:60
F V T S T D S S S V T S S T P I P G S R      P:20


. . . . . .     G:4981
cctacgacacgccttggtttatatagccgtgccacacaacaggttaaggtagtcgaccct     C:60
P T T R L G L Y S R A T Q Q V K V V D P      P:20


. . . . . .     G:5041
gcttttatgtcatcaccacagaaattagtaacatataacaatcctgtttttgagggcgtt     C:60
A F M S S P Q K L V T Y N N P V F E G V      P:20


. . . . . .     G:5101
gatacagatgaaactataatttttgatcgttcacaacttttacctgcaccggatcctgat     C:60
D T D E T I I F D R S Q L L P A P D P D      P:20


. . . . . .     G:5161
tttttagacattatagctttgcataggcctgcattaacctctcgaagaggtactgttagg     C:60
F L D I I A L H R P A L T S R R G T V R      P:20


. . . . . .     G:5221
tttagcaggcttggtaataaggccaccctacgtacacgtagtggaaaacaaattggggca     C:60
F S R L G N K A T L R T R S G K Q I G A      P:20


. . . . . .     G:5281
cgggtacattattatcatgatattagtcctatccagcctgctgaagttcaggaagacata     C:60
R V H Y Y H D I S P I Q P A E V Q E D I      P:20


. . . . . .     G:5341
gaattgcaacctttattaccacagtctgtgtccccttacactattaatgatggtttgtat     C:60
E L Q P L L P Q S V S P Y T I N D G L Y      P:20


. . . . . .     G:5401
gatgtgtatgcagattctttgcagcaacccacgtttcacttaccttccacactttctacc     C:60
D V Y A D S L Q Q P T F H L P S T L S T      P:20


. . . . . .     G:5461
cataataatactttcactgtacctattaatagtggtattgactttgtatatcaacccact     C:60
H N N T F T V P I N S G I D F V Y Q P T      P:20


. . . . . .     G:5521
atgtccattgagtcaggtcctgacattccattaccttcgttacccacacatactcctttt     C:60
M S I E S G P D I P L P S L P T H T P F      P:20


. . . . . .     G:5581
gttcctatagcccctacagctccatctacatctattattgttgatggtacagattttatt     C:60
V P I A P T A P S T S I I V D G T D F I      P:20


. . . . . .     G:5641
ttacatcctagttattttttactacgtcgcaggcgtaaacgttttccatatttttttaca     C:60
L H P S Y F L L R R R R K R F P Y F F T      P:20


. .      G:5662
gatgtccgtgtggcggcctag      C:21
D V R V A A      P:6