HPV45 L2
Accession: H000151
Uniprot: P36761
Protein: L2
Organism: Human papillomavirus type 45
Function
Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.
Domain&Motif
| method | domain/motif name | position | length | description | graphical view |
|---|---|---|---|---|---|
| CDD | Late_protein_L2 | 4278-5597 | 1320 | Late Protein L2; | |
| CDD | PHA02777 | 4278-5246 | 969 | major capsid L1 protein; Provisional | |
| MOTIF_SCAN | 5259-5270 | 12 | |||
| MOTIF_SCAN | 5394-5405 | 12 | |||
| MOTIF_SCAN | 5499-5510 | 12 | |||
| MOTIF_SCAN | 4263-4274 | 12 | |||
| MOTIF_SCAN | 5103-5114 | 12 | |||
| MOTIF_SCAN | 4272-4283 | 12 | |||
| MOTIF_SCAN | 4350-4361 | 12 | |||
| MOTIF_SCAN | 4473-4484 | 12 | |||
| MOTIF_SCAN | 4548-4559 | 12 | |||
| MOTIF_SCAN | 4611-4622 | 12 | |||
| MOTIF_SCAN | 4731-4742 | 12 | |||
| MOTIF_SCAN | 4848-4859 | 12 | |||
| MOTIF_SCAN | 5415-5426 | 12 | |||
| MOTIF_SCAN | 5439-5450 | 12 | |||
| MOTIF_SCAN | 4344-4361 | 18 | |||
| MOTIF_SCAN | 4386-4403 | 18 | |||
| MOTIF_SCAN | 4407-4424 | 18 | |||
| MOTIF_SCAN | 4431-4448 | 18 | |||
| MOTIF_SCAN | 4458-4475 | 18 | |||
| MOTIF_SCAN | 4782-4799 | 18 | |||
| MOTIF_SCAN | 5133-5150 | 18 | |||
| MOTIF_SCAN | 5523-5540 | 18 | |||
| MOTIF_SCAN | 4242-4250 | 9 | |||
| MOTIF_SCAN | 4293-4301 | 9 | |||
| MOTIF_SCAN | 4884-4892 | 9 | |||
| MOTIF_SCAN | 5097-5105 | 9 | |||
| MOTIF_SCAN | 5112-5120 | 9 | |||
| MOTIF_SCAN | 5160-5168 | 9 | |||
| MOTIF_SCAN | 4386-4463 | 78 | |||
| MOTIF_SCAN | 4248-5597 | 1350 | |||
| MOTIF_SCAN | 4248-5597 | 1350 | |||
| INTERPROSCAN | 4257-5273 | 1017 | |||
| MOTIF_SEAR_IN_PROT | 4248-5597 | 1350 | |||
| MOTIF_SEAR_IN_PROT | 4257-5246 | 990 | |||
| MOTIF_SEAR_IN_PROT | 4569-4799 | 231 | |||
| MOTIF_SEAR_IN_PROT | 4515-4649 | 135 | |||
| MOTIF_SEAR_IN_PROT | 4257-5273 | 1017 | |||
| PROSITE_SCAN | 4242-4250 | 9 | |||
| PROSITE_SCAN | 4263-4274 | 12 | |||
| PROSITE_SCAN | 4272-4283 | 12 | |||
| PROSITE_SCAN | 4293-4301 | 9 | |||
| PROSITE_SCAN | 4344-4361 | 18 | |||
| PROSITE_SCAN | 4350-4361 | 12 | |||
| PROSITE_SCAN | 4386-4403 | 18 | |||
| PROSITE_SCAN | 4407-4424 | 18 | |||
| PROSITE_SCAN | 4431-4448 | 18 | |||
| PROSITE_SCAN | 4458-4475 | 18 | |||
| PROSITE_SCAN | 4473-4484 | 12 | |||
| PROSITE_SCAN | 4548-4559 | 12 | |||
| PROSITE_SCAN | 4611-4622 | 12 | |||
| PROSITE_SCAN | 4731-4742 | 12 | |||
| PROSITE_SCAN | 4782-4799 | 18 | |||
| PROSITE_SCAN | 4848-4859 | 12 | |||
| PROSITE_SCAN | 4884-4892 | 9 | |||
| PROSITE_SCAN | 5097-5105 | 9 | |||
| PROSITE_SCAN | 5103-5114 | 12 | |||
| PROSITE_SCAN | 5112-5120 | 9 | |||
| PROSITE_SCAN | 5133-5150 | 18 | |||
| PROSITE_SCAN | 5160-5168 | 9 | |||
| PROSITE_SCAN | 5259-5270 | 12 | |||
| PROSITE_SCAN | 5394-5405 | 12 | |||
| PROSITE_SCAN | 5415-5426 | 12 | |||
| PROSITE_SCAN | 5439-5450 | 12 | |||
| PROSITE_SCAN | 5499-5510 | 12 | |||
| PROSITE_SCAN | 5523-5540 | 18 | |||
| SBASE | 4278-5597 | 1320 | |||
| RADAR | 4398-4535 | 138 | |||
| RADAR | 4557-4730 | 174 | |||
| RADAR | 4749-4922 | 174 | |||
| RADAR | 4929-5159 | 231 | |||
| RADAR | 5160-5357 | 198 | |||
| TMPRED_SERVER | 4368-4424 | 57 | |||
| TMPRED_SERVER | 4368-4430 | 63 | |||
| TMPRED_SERVER | 4545-4604 | 60 | |||
| TMPRED_SERVER | 4548-4601 | 54 | |||
| TMPRED_SERVER | 4602-4661 | 60 | |||
| TMPRED_SERVER | 4671-4733 | 63 | |||
| TMPRED_SERVER | 5361-5417 | 57 | |||
| TMPRED_SERVER | 5367-5426 | 60 | |||
| TMPRED_SERVER | 5511-5567 | 57 | |||
| TMPRED_SERVER | 5514-5570 | 57 | |||
| UNIPROTKB | 4236-4271 | 36 | |||
| UNIPROTKB | 5565-5591 | 27 |
Sequence
. . . . . . G:4295
atggtatcccaccgtgcagcacgtcgcaagcgggcctctgcaactgacttatatagaaca C:60
M V S H R A A R R K R A S A T D L Y R T P:20
. . . . . . G:4355
tgtaagcaatccggtacgtgcccccctgatgttattaacaaagtggaaggcacaacctta C:60
C K Q S G T C P P D V I N K V E G T T L P:20
. . . . . . G:4415
gctgataaaattttacagtggtctagccttgggatatttttgggtggccttggcattggt C:60
A D K I L Q W S S L G I F L G G L G I G P:20
. . . . . . G:4475
accggcagtggttctggaggccgtacgggctatgtacccttagggggcaggtctaatact C:60
T G S G S G G R T G Y V P L G G R S N T P:20
. . . . . . G:4535
gttgtggatgttggccccactaggccacctgtggttattgaacctgtagggcctactgat C:60
V V D V G P T R P P V V I E P V G P T D P:20
. . . . . . G:4595
ccatctattgttacgttggtagaggattccagtgttgttgcctctggtgctccggttccc C:60
P S I V T L V E D S S V V A S G A P V P P:20
. . . . . . G:4655
acatttaccggaacctctgggtttgaaattacgtcttctggtactaccacaccagctgtg C:60
T F T G T S G F E I T S S G T T T P A V P:20
. . . . . . G:4715
ttggacatcacacctaccgtggactctgtttctatttcgtcaactagttttacaaatcct C:60
L D I T P T V D S V S I S S T S F T N P P:20
. . . . . . G:4775
gcattttctgatccctctattattgaggtgccccaaacaggggaggtatcaggtaatata C:60
A F S D P S I I E V P Q T G E V S G N I P:20
. . . . . . G:4835
tttgttggtacaccaacatcgggcagccatggatatgaggaaatacctttacaaacattt C:60
F V G T P T S G S H G Y E E I P L Q T F P:20
. . . . . . G:4895
gcatcttctgggtcaggtacggaacccattagtagtacccccctccctactgtgcggcgg C:60
A S S G S G T E P I S S T P L P T V R R P:20
. . . . . . G:4955
gtacggggtccccgcctgtatagtagggctaatcaacaggtccgtgtgtccacctcacag C:60
V R G P R L Y S R A N Q Q V R V S T S Q P:20
. . . . . . G:5015
tttttaacacatccctcatcgttggttacatttgataatccagcttatgagcccctggac C:60
F L T H P S S L V T F D N P A Y E P L D P:20
. . . . . . G:5075
accacactatcctttgagcctaccagtaatgttcctgattccgattttatggatattatt C:60
T T L S F E P T S N V P D S D F M D I I P:20
. . . . . . G:5135
cgtttgcataggccagcattatcctctagacgtggcactgttagatttagtagattgggt C:60
R L H R P A L S S R R G T V R F S R L G P:20
. . . . . . G:5195
caaagggcaaccatgtttacacgtagtggtaaacaaatagggggtagggtacatttttac C:60
Q R A T M F T R S G K Q I G G R V H F Y P:20
. . . . . . G:5255
catgatataagccccattgctgctacagaggaaattgaattgcagcctttaattagtgct C:60
H D I S P I A A T E E I E L Q P L I S A P:20
. . . . . . G:5315
acaaatgatagtgacctgtttgatgtatatgcagacttcccacctcctgcgtccactaca C:60
T N D S D L F D V Y A D F P P P A S T T P:20
. . . . . . G:5375
cctagcactatacacaaatcatttacatatccaaagtattccttgaccatgccttctact C:60
P S T I H K S F T Y P K Y S L T M P S T P:20
. . . . . . G:5435
gctgcatcctcttacagtaatgttacagtaccattaacatctgcatgggatgtacctata C:60
A A S S Y S N V T V P L T S A W D V P I P:20
. . . . . . G:5495
tatactggcccggacattatattgccatcccatactcctatgtggcctagtacatctcct C:60
Y T G P D I I L P S H T P M W P S T S P P:20
. . . . . . G:5555
accaatgcttccaccaccacctatataggtattcatggcacacaatattatttatggcca C:60
T N A S T T T Y I G I H G T Q Y Y L W P P:20
. . . . . . G:5615
tggtattattattttcctaaaaaacgtaaacgtattccctatttttttgcagatggcttt C:60
W Y Y Y F P K K R K R I P Y F F A D G F P:20
. G:5627
gtggcggcctag C:12
V A A P:3
