HPV16 L2

Accession: H000140
NC: NP_041331.1
Uniprot: P03107
Protein: L2
Organism: Human papillomavirus type 16

Function

Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.

Mutation

4236-4300
4301-4400
4401-4500
4501-4600
4601-4700
4701-4800
4801-4900
4901-5000
5001-5100
5101-5200
5201-5300
5301-5400
5401-5500
5501-5600
5601-5657
Legend:same sensemissenseinsertiondeletion
show more details

Domain&Motif

method domain/motif name position length description graphical view
CDDLate_protein_L24254-56271374Late Protein L2;
CDDPHA027774257-52581002major capsid L1 protein; Provisional
MOTIF_SCAN4680-469112
MOTIF_SCAN5424-543512
MOTIF_SCAN5490-550112
MOTIF_SCAN4266-427712
MOTIF_SCAN4353-436412
MOTIF_SCAN4476-448712
MOTIF_SCAN4554-456512
MOTIF_SCAN4572-458312
MOTIF_SCAN4644-465512
MOTIF_SCAN4719-473012
MOTIF_SCAN4752-476312
MOTIF_SCAN5040-505112
MOTIF_SCAN5226-523712
MOTIF_SCAN5469-548012
MOTIF_SCAN4389-440618
MOTIF_SCAN4410-442718
MOTIF_SCAN4434-445118
MOTIF_SCAN4587-460418
MOTIF_SCAN4767-478418
MOTIF_SCAN5133-515018
MOTIF_SCAN5154-517118
MOTIF_SCAN5442-545918
MOTIF_SCAN4251-42599
MOTIF_SCAN4263-42719
MOTIF_SCAN4296-43049
MOTIF_SCAN5118-51269
MOTIF_SCAN5166-51749
MOTIF_SCAN5181-51899
MOTIF_SCAN4380-446384
MOTIF_SCAN4641-4877237
MOTIF_SCAN5220-528566
MOTIF_SCAN4248-56271380
MOTIF_SCAN4248-56271380
INTERPROSCAN4257-56181362
MOTIF_SEAR_IN_PROT4254-56271374
MOTIF_SEAR_IN_PROT4257-53121056
MOTIF_SEAR_IN_PROT4419-4655237
MOTIF_SEAR_IN_PROT4257-56181362
PROSITE_SCAN4251-42599
PROSITE_SCAN4263-42719
PROSITE_SCAN4266-427712
PROSITE_SCAN4296-43049
PROSITE_SCAN4353-436412
PROSITE_SCAN4389-440618
PROSITE_SCAN4410-442718
PROSITE_SCAN4434-445118
PROSITE_SCAN4476-448712
PROSITE_SCAN4554-456512
PROSITE_SCAN4572-458312
PROSITE_SCAN4587-460418
PROSITE_SCAN4641-4877237
PROSITE_SCAN4644-465512
PROSITE_SCAN4680-469112
PROSITE_SCAN4719-473012
PROSITE_SCAN4752-476312
PROSITE_SCAN4767-478418
PROSITE_SCAN5040-505112
PROSITE_SCAN5118-51269
PROSITE_SCAN5133-515018
PROSITE_SCAN5154-517118
PROSITE_SCAN5166-51749
PROSITE_SCAN5181-51899
PROSITE_SCAN5226-523712
PROSITE_SCAN5424-543512
PROSITE_SCAN5442-545918
PROSITE_SCAN5469-548012
PROSITE_SCAN5490-550112
SBASE4248-56271380
RADAR4473-456896
RADAR4569-4715147
RADAR4716-4859144
RADAR4860-4997138
RADAR4998-507578
RADAR5418-550487
RADAR5538-557942
RADAR5166-5279114
RADAR5289-5399111
TMPRED_SERVER4371-442757
TMPRED_SERVER4383-443957
TMPRED_SERVER5406-545651
TMPRED_SERVER5421-547151

Sequence

         .         .         .         .         .         .     G:4295
atgcgacacaaacgttctgcaaaacgcacaaaacgtgcatcggctacccaactttataaa     C:60
M R H K R S A K R T K R A S A T Q L Y K      P:20


. . . . . .     G:4355
acatgcaaacaggcaggtacatgtccacctgacattatacctaaggttgaaggcaaaact     C:60
T C K Q A G T C P P D I I P K V E G K T      P:20


. . . . . .     G:4415
attgctgaacaaatattacaatatggaagtatgggtgtattttttggtgggttaggaatt     C:60
I A E Q I L Q Y G S M G V F F G G L G I      P:20


. . . . . .     G:4475
ggaacagggtcgggtacaggcggacgcactgggtatattccattgggaacaaggcctccc     C:60
G T G S G T G G R T G Y I P L G T R P P      P:20


. . . . . .     G:4535
acagctacagatacacttgctcctgtaagaccccctttaacagtagatcctgtgggccct     C:60
T A T D T L A P V R P P L T V D P V G P      P:20


. . . . . .     G:4595
tctgatccttctatagtttctttagtggaagaaactagttttattgatgctggtgcacca     C:60
S D P S I V S L V E E T S F I D A G A P      P:20


. . . . . .     G:4655
acatctgtaccttccattcccccagatgtatcaggatttagtattactacttcaactgat     C:60
T S V P S I P P D V S G F S I T T S T D      P:20


. . . . . .     G:4715
accacacctgctatattagatattaataatactgttactactgttactacacataataat     C:60
T T P A I L D I N N T V T T V T T H N N      P:20


. . . . . .     G:4775
cccactttcactgacccatctgtattgcagcctccaacacctgcagaaactggagggcat     C:60
P T F T D P S V L Q P P T P A E T G G H      P:20


. . . . . .     G:4835
tttacactttcatcatccactattagtacacataattatgaagaaattcctatggataca     C:60
F T L S S S T I S T H N Y E E I P M D T      P:20


. . . . . .     G:4895
tttattgttagcacaaaccctaacacagtaactagtagcacacccataccagggtctcgc     C:60
F I V S T N P N T V T S S T P I P G S R      P:20


. . . . . .     G:4955
ccagtggcacgcctaggattatatagtcgcacaacacaacaggttaaagttgtagaccct     C:60
P V A R L G L Y S R T T Q Q V K V V D P      P:20


. . . . . .     G:5015
gcttttgtaaccactcccactaaacttattacatatgataatcctgcatatgaaggtata     C:60
A F V T T P T K L I T Y D N P A Y E G I      P:20


. . . . . .     G:5075
gatgtggataatacattatatttttctagtaatgataatagtattaatatagctccagat     C:60
D V D N T L Y F S S N D N S I N I A P D      P:20


. . . . . .     G:5135
cctgactttttggatatagttgctttacataggccagcattaacctctaggcgtactggc     C:60
P D F L D I V A L H R P A L T S R R T G      P:20


. . . . . .     G:5195
attaggtacagtagaattggtaataaacaaacactacgtactcgtagtggaaaatctata     C:60
I R Y S R I G N K Q T L R T R S G K S I      P:20


. . . . . .     G:5255
ggtgctaaggtacattattattatgatttaagtactattgatcctgcagaagaaatagaa     C:60
G A K V H Y Y Y D L S T I D P A E E I E      P:20


. . . . . .     G:5315
ttacaaactataacaccttctacatatactaccacttcacatgcagcctcacctacttct     C:60
L Q T I T P S T Y T T T S H A A S P T S      P:20


. . . . . .     G:5375
attaataatggattatatgatatttatgcagatgactttattacagatacttctacaacc     C:60
I N N G L Y D I Y A D D F I T D T S T T      P:20


. . . . . .     G:5435
ccggtaccatctgtaccctctacatctttatcaggttatattcctgcaaatacaacaatt     C:60
P V P S V P S T S L S G Y I P A N T T I      P:20


. . . . . .     G:5495
ccttttggtggtgcatacaatattcctttagtatcaggtcctgatatacccattaatata     C:60
P F G G A Y N I P L V S G P D I P I N I      P:20


. . . . . .     G:5555
actgaccaagctccttcattaattcctatagttccagggtctccacaatatacaattatt     C:60
T D Q A P S L I P I V P G S P Q Y T I I      P:20


. . . . . .     G:5615
gctgatgcaggtgacttttatttacatcctagttattacatgttacgaaaacgacgtaaa     C:60
A D A G D F Y L H P S Y Y M L R K R R K      P:20


. . . .      G:5657
cgtttaccatattttttttcagatgtctctttggctgcctag      C:42
R L P Y F F S D V S L A A      P:13