HPV11 L2

Accession: H000139
Uniprot: P04013
Protein: L2
Organism: Human papillomavirus type 11

Function

Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.

Domain&Motif

method domain/motif name position length description graphical view
CDDLate_protein_L24456-57601305Late Protein L2;
CDDPHA027774456-57541299major capsid L1 protein; Provisional
MOTIF_SCAN4855-486612
MOTIF_SCAN5440-545112
MOTIF_SCAN5557-556812
MOTIF_SCAN4441-445212
MOTIF_SCAN4528-453912
MOTIF_SCAN4729-474012
MOTIF_SCAN4807-481812
MOTIF_SCAN5014-502512
MOTIF_SCAN5602-561312
MOTIF_SCAN5692-570312
MOTIF_SCAN4564-458118
MOTIF_SCAN4585-460218
MOTIF_SCAN4609-462618
MOTIF_SCAN4663-468018
MOTIF_SCAN5311-532818
MOTIF_SCAN5341-535818
MOTIF_SCAN4471-44799
MOTIF_SCAN4642-46509
MOTIF_SCAN5275-52839
MOTIF_SCAN5143-5265123
MOTIF_SCAN4555-4668114
MOTIF_SCAN4426-57601335
MOTIF_SCAN4426-57601335
INTERPROSCAN4432-4788357
INTERPROSCAN4753-5448696
MOTIF_SEAR_IN_PROT4426-57601335
MOTIF_SEAR_IN_PROT4432-57541323
MOTIF_SEAR_IN_PROT4510-4815306
MOTIF_SEAR_IN_PROT4561-4830270
MOTIF_SEAR_IN_PROT5335-5505171
MOTIF_SEAR_IN_PROT4432-4788357
MOTIF_SEAR_IN_PROT4753-5448696
PROSITE_SCAN4441-445212
PROSITE_SCAN4471-44799
PROSITE_SCAN4528-453912
PROSITE_SCAN4564-458118
PROSITE_SCAN4585-460218
PROSITE_SCAN4609-462618
PROSITE_SCAN4642-46509
PROSITE_SCAN4663-468018
PROSITE_SCAN4729-474012
PROSITE_SCAN4807-481812
PROSITE_SCAN4855-486612
PROSITE_SCAN5014-502512
PROSITE_SCAN5275-52839
PROSITE_SCAN5311-532818
PROSITE_SCAN5341-535818
PROSITE_SCAN5440-545112
PROSITE_SCAN5557-556812
PROSITE_SCAN5602-561312
PROSITE_SCAN5692-570312
SBASE4456-57601305
RADAR4915-499581
RADAR5482-5583102
TMPRED_SERVER4555-461460
TMPRED_SERVER4558-461457
TMPRED_SERVER5638-569457
TMPRED_SERVER5674-572451
UNIPROTKB4417-444933
UNIPROTKB5728-575427

Sequence

         .         .         .         .         .         .     G:4476
atgaaacctagggcacgcagacgtaaacgtgcgtcagccacacaactatatcaaacatgc     C:60
M K P R A R R R K R A S A T Q L Y Q T C      P:20


. . . . . .     G:4536
aaggccactggtacatgtcccccagatgtaattcctaaagttgaacatactactattgca     C:60
K A T G T C P P D V I P K V E H T T I A      P:20


. . . . . .     G:4596
gatcaaatattaaaatggggaagcttaggggttttttttggtgggttaggtattggtaca     C:60
D Q I L K W G S L G V F F G G L G I G T      P:20


. . . . . .     G:4656
ggggctggtagtggcggtcgtgcagggtatatacccttgggaagctctcccaagcctgct     C:60
G A G S G G R A G Y I P L G S S P K P A      P:20


. . . . . .     G:4716
attactggggggccagcagcacgtccgccagtgcttgtggagcctgttgccccttccgat     C:60
I T G G P A A R P P V L V E P V A P S D      P:20


. . . . . .     G:4776
ccctccattgtgtccttaattgaggagtctgctattattaatgctggtgcacctgaggtg     C:60
P S I V S L I E E S A I I N A G A P E V      P:20


. . . . . .     G:4836
gtaccccctacacagggtggctttactataacatcatctgaatcgactacacctgctatt     C:60
V P P T Q G G F T I T S S E S T T P A I      P:20


. . . . . .     G:4896
ttagatgtgtctgttaccaatcacactaccactagtgtgtttcaaaatcccctgtttaca     C:60
L D V S V T N H T T T S V F Q N P L F T      P:20


. . . . . .     G:4956
gaaccgtctgtaatacagccccaaccacctgtggaggccagtggtcacatacttatatct     C:60
E P S V I Q P Q P P V E A S G H I L I S      P:20


. . . . . .     G:5016
gccccaacaataacatcccaacatgtagaagacattccactagacacttttgttgtatcc     C:60
A P T I T S Q H V E D I P L D T F V V S      P:20


. . . . . .     G:5076
tctagtgatagtggacctacatccagtactcctcttcctcgtgcttttcctcggcctcgg     C:60
S S D S G P T S S T P L P R A F P R P R      P:20


. . . . . .     G:5136
gtgggtttgtatagtcgtgccttacagcaggtacaggttacggaccccgcgtttttgtcc     C:60
V G L Y S R A L Q Q V Q V T D P A F L S      P:20


. . . . . .     G:5196
acgccacagcgattggtaacttatgacaaccctgtctatgaaggagaagatgtaagttta     C:60
T P Q R L V T Y D N P V Y E G E D V S L      P:20


. . . . . .     G:5256
caatttacccatgagtctatccacaatgcacctgatgaagcatttatggatattattaga     C:60
Q F T H E S I H N A P D E A F M D I I R      P:20


. . . . . .     G:5316
ctacatagaccagctataacgtccagacggggtcttgtgcgttttagtcgcattgggcaa     C:60
L H R P A I T S R R G L V R F S R I G Q      P:20


. . . . . .     G:5376
cgggggtccatgtacacacgcagtggacaacatataggtgcccgcatacattattttcag     C:60
R G S M Y T R S G Q H I G A R I H Y F Q      P:20


. . . . . .     G:5436
gacatttcaccagttacacaagctgcagaggaaatagaactgcaccctctagtggctgca     C:60
D I S P V T Q A A E E I E L H P L V A A      P:20


. . . . . .     G:5496
gaaaatgacacgtttgatatttatgctgaaccatttgaccctatccctgaccctgtccaa     C:60
E N D T F D I Y A E P F D P I P D P V Q      P:20


. . . . . .     G:5556
cattctgttacacagtcttatcttacctccacacctaataccctttcacaatcgtggggt     C:60
H S V T Q S Y L T S T P N T L S Q S W G      P:20


. . . . . .     G:5616
aataccacagtcccattgtcaatccctagtgactggtttgtgcagtctgggcctgacata     C:60
N T T V P L S I P S D W F V Q S G P D I      P:20


. . . . . .     G:5676
acttttcctactgcatctatgggaacaccctttagtcctgtaactcctgctttacctaca     C:60
T F P T A S M G T P F S P V T P A L P T      P:20


. . . . . .     G:5736
ggccctgtttttattacaggttctgacttctatttgcatcctacatggtactttgcacgc     C:60
G P V F I T G S D F Y L H P T W Y F A R      P:20


. . . .      G:5784
agacgccgtaaacgtattcccttattttttacagatgtggcggcctag      C:48
R R R K R I P L F F T D V A A      P:15