HPV11 L2
Accession: H000139
Uniprot: P04013
Protein: L2
Organism: Human papillomavirus type 11
Function
Minor capsid protein. It is required for DNA packaging. It mediates several facets of viral entry including endosomal escape after uncoating.
Domain&Motif
| method | domain/motif name | position | length | description | graphical view |
|---|---|---|---|---|---|
| CDD | Late_protein_L2 | 4456-5760 | 1305 | Late Protein L2; | |
| CDD | PHA02777 | 4456-5754 | 1299 | major capsid L1 protein; Provisional | |
| MOTIF_SCAN | 4855-4866 | 12 | |||
| MOTIF_SCAN | 5440-5451 | 12 | |||
| MOTIF_SCAN | 5557-5568 | 12 | |||
| MOTIF_SCAN | 4441-4452 | 12 | |||
| MOTIF_SCAN | 4528-4539 | 12 | |||
| MOTIF_SCAN | 4729-4740 | 12 | |||
| MOTIF_SCAN | 4807-4818 | 12 | |||
| MOTIF_SCAN | 5014-5025 | 12 | |||
| MOTIF_SCAN | 5602-5613 | 12 | |||
| MOTIF_SCAN | 5692-5703 | 12 | |||
| MOTIF_SCAN | 4564-4581 | 18 | |||
| MOTIF_SCAN | 4585-4602 | 18 | |||
| MOTIF_SCAN | 4609-4626 | 18 | |||
| MOTIF_SCAN | 4663-4680 | 18 | |||
| MOTIF_SCAN | 5311-5328 | 18 | |||
| MOTIF_SCAN | 5341-5358 | 18 | |||
| MOTIF_SCAN | 4471-4479 | 9 | |||
| MOTIF_SCAN | 4642-4650 | 9 | |||
| MOTIF_SCAN | 5275-5283 | 9 | |||
| MOTIF_SCAN | 5143-5265 | 123 | |||
| MOTIF_SCAN | 4555-4668 | 114 | |||
| MOTIF_SCAN | 4426-5760 | 1335 | |||
| MOTIF_SCAN | 4426-5760 | 1335 | |||
| INTERPROSCAN | 4432-4788 | 357 | |||
| INTERPROSCAN | 4753-5448 | 696 | |||
| MOTIF_SEAR_IN_PROT | 4426-5760 | 1335 | |||
| MOTIF_SEAR_IN_PROT | 4432-5754 | 1323 | |||
| MOTIF_SEAR_IN_PROT | 4510-4815 | 306 | |||
| MOTIF_SEAR_IN_PROT | 4561-4830 | 270 | |||
| MOTIF_SEAR_IN_PROT | 5335-5505 | 171 | |||
| MOTIF_SEAR_IN_PROT | 4432-4788 | 357 | |||
| MOTIF_SEAR_IN_PROT | 4753-5448 | 696 | |||
| PROSITE_SCAN | 4441-4452 | 12 | |||
| PROSITE_SCAN | 4471-4479 | 9 | |||
| PROSITE_SCAN | 4528-4539 | 12 | |||
| PROSITE_SCAN | 4564-4581 | 18 | |||
| PROSITE_SCAN | 4585-4602 | 18 | |||
| PROSITE_SCAN | 4609-4626 | 18 | |||
| PROSITE_SCAN | 4642-4650 | 9 | |||
| PROSITE_SCAN | 4663-4680 | 18 | |||
| PROSITE_SCAN | 4729-4740 | 12 | |||
| PROSITE_SCAN | 4807-4818 | 12 | |||
| PROSITE_SCAN | 4855-4866 | 12 | |||
| PROSITE_SCAN | 5014-5025 | 12 | |||
| PROSITE_SCAN | 5275-5283 | 9 | |||
| PROSITE_SCAN | 5311-5328 | 18 | |||
| PROSITE_SCAN | 5341-5358 | 18 | |||
| PROSITE_SCAN | 5440-5451 | 12 | |||
| PROSITE_SCAN | 5557-5568 | 12 | |||
| PROSITE_SCAN | 5602-5613 | 12 | |||
| PROSITE_SCAN | 5692-5703 | 12 | |||
| SBASE | 4456-5760 | 1305 | |||
| RADAR | 4915-4995 | 81 | |||
| RADAR | 5482-5583 | 102 | |||
| TMPRED_SERVER | 4555-4614 | 60 | |||
| TMPRED_SERVER | 4558-4614 | 57 | |||
| TMPRED_SERVER | 5638-5694 | 57 | |||
| TMPRED_SERVER | 5674-5724 | 51 | |||
| UNIPROTKB | 4417-4449 | 33 | |||
| UNIPROTKB | 5728-5754 | 27 |
Sequence
. . . . . . G:4476
atgaaacctagggcacgcagacgtaaacgtgcgtcagccacacaactatatcaaacatgc C:60
M K P R A R R R K R A S A T Q L Y Q T C P:20
. . . . . . G:4536
aaggccactggtacatgtcccccagatgtaattcctaaagttgaacatactactattgca C:60
K A T G T C P P D V I P K V E H T T I A P:20
. . . . . . G:4596
gatcaaatattaaaatggggaagcttaggggttttttttggtgggttaggtattggtaca C:60
D Q I L K W G S L G V F F G G L G I G T P:20
. . . . . . G:4656
ggggctggtagtggcggtcgtgcagggtatatacccttgggaagctctcccaagcctgct C:60
G A G S G G R A G Y I P L G S S P K P A P:20
. . . . . . G:4716
attactggggggccagcagcacgtccgccagtgcttgtggagcctgttgccccttccgat C:60
I T G G P A A R P P V L V E P V A P S D P:20
. . . . . . G:4776
ccctccattgtgtccttaattgaggagtctgctattattaatgctggtgcacctgaggtg C:60
P S I V S L I E E S A I I N A G A P E V P:20
. . . . . . G:4836
gtaccccctacacagggtggctttactataacatcatctgaatcgactacacctgctatt C:60
V P P T Q G G F T I T S S E S T T P A I P:20
. . . . . . G:4896
ttagatgtgtctgttaccaatcacactaccactagtgtgtttcaaaatcccctgtttaca C:60
L D V S V T N H T T T S V F Q N P L F T P:20
. . . . . . G:4956
gaaccgtctgtaatacagccccaaccacctgtggaggccagtggtcacatacttatatct C:60
E P S V I Q P Q P P V E A S G H I L I S P:20
. . . . . . G:5016
gccccaacaataacatcccaacatgtagaagacattccactagacacttttgttgtatcc C:60
A P T I T S Q H V E D I P L D T F V V S P:20
. . . . . . G:5076
tctagtgatagtggacctacatccagtactcctcttcctcgtgcttttcctcggcctcgg C:60
S S D S G P T S S T P L P R A F P R P R P:20
. . . . . . G:5136
gtgggtttgtatagtcgtgccttacagcaggtacaggttacggaccccgcgtttttgtcc C:60
V G L Y S R A L Q Q V Q V T D P A F L S P:20
. . . . . . G:5196
acgccacagcgattggtaacttatgacaaccctgtctatgaaggagaagatgtaagttta C:60
T P Q R L V T Y D N P V Y E G E D V S L P:20
. . . . . . G:5256
caatttacccatgagtctatccacaatgcacctgatgaagcatttatggatattattaga C:60
Q F T H E S I H N A P D E A F M D I I R P:20
. . . . . . G:5316
ctacatagaccagctataacgtccagacggggtcttgtgcgttttagtcgcattgggcaa C:60
L H R P A I T S R R G L V R F S R I G Q P:20
. . . . . . G:5376
cgggggtccatgtacacacgcagtggacaacatataggtgcccgcatacattattttcag C:60
R G S M Y T R S G Q H I G A R I H Y F Q P:20
. . . . . . G:5436
gacatttcaccagttacacaagctgcagaggaaatagaactgcaccctctagtggctgca C:60
D I S P V T Q A A E E I E L H P L V A A P:20
. . . . . . G:5496
gaaaatgacacgtttgatatttatgctgaaccatttgaccctatccctgaccctgtccaa C:60
E N D T F D I Y A E P F D P I P D P V Q P:20
. . . . . . G:5556
cattctgttacacagtcttatcttacctccacacctaataccctttcacaatcgtggggt C:60
H S V T Q S Y L T S T P N T L S Q S W G P:20
. . . . . . G:5616
aataccacagtcccattgtcaatccctagtgactggtttgtgcagtctgggcctgacata C:60
N T T V P L S I P S D W F V Q S G P D I P:20
. . . . . . G:5676
acttttcctactgcatctatgggaacaccctttagtcctgtaactcctgctttacctaca C:60
T F P T A S M G T P F S P V T P A L P T P:20
. . . . . . G:5736
ggccctgtttttattacaggttctgacttctatttgcatcctacatggtactttgcacgc C:60
G P V F I T G S D F Y L H P T W Y F A R P:20
. . . . G:5784
agacgccgtaaacgtattcccttattttttacagatgtggcggcctag C:48
R R R K R I P L F F T D V A A P:15
