HPV45 L1
Accession: H000125
Uniprot: P36741
Protein: L1
Organism: Human papillomavirus type 45
Function
Major capsid protein. It can form virus-like particles. It forms the pentameric assembly unit of the viral shell.
Domain&Motif
| method | domain/motif name | position | length | description | graphical view |
|---|---|---|---|---|---|
| CDD | PHA02778 | 5608-7056 | 1449 | major capsid L1 protein; Provisional | |
| CDD | Late_protein_L1 | 5614-7065 | 1452 | L1 (late) protein; | |
| MOTIF_SCAN | 7009-7020 | 12 | |||
| MOTIF_SCAN | 6046-6057 | 12 | |||
| MOTIF_SCAN | 6637-6648 | 12 | |||
| MOTIF_SCAN | 6802-6813 | 12 | |||
| MOTIF_SCAN | 7045-7056 | 12 | |||
| MOTIF_SCAN | 5674-5685 | 12 | |||
| MOTIF_SCAN | 6187-6198 | 12 | |||
| MOTIF_SCAN | 6244-6255 | 12 | |||
| MOTIF_SCAN | 6256-6267 | 12 | |||
| MOTIF_SCAN | 6610-6621 | 12 | |||
| MOTIF_SCAN | 6676-6687 | 12 | |||
| MOTIF_SCAN | 6808-6819 | 12 | |||
| MOTIF_SCAN | 6856-6867 | 12 | |||
| MOTIF_SCAN | 6916-6927 | 12 | |||
| MOTIF_SCAN | 6988-6999 | 12 | |||
| MOTIF_SCAN | 5779-5796 | 18 | |||
| MOTIF_SCAN | 5860-5877 | 18 | |||
| MOTIF_SCAN | 5920-5937 | 18 | |||
| MOTIF_SCAN | 5938-5955 | 18 | |||
| MOTIF_SCAN | 6088-6105 | 18 | |||
| MOTIF_SCAN | 6445-6462 | 18 | |||
| MOTIF_SCAN | 6505-6522 | 18 | |||
| MOTIF_SCAN | 5722-5730 | 9 | |||
| MOTIF_SCAN | 5893-5901 | 9 | |||
| MOTIF_SCAN | 6622-6630 | 9 | |||
| MOTIF_SCAN | 6868-6876 | 9 | |||
| MOTIF_SCAN | 7138-7146 | 9 | |||
| MOTIF_SCAN | 5620-5643 | 24 | |||
| MOTIF_SCAN | 6979-7005 | 27 | |||
| MOTIF_SCAN | 5608-7131 | 1524 | |||
| MOTIF_SCAN | 6979-7005 | 27 | |||
| MOTIF_SCAN | 5608-7131 | 1524 | |||
| INTERPROSCAN | 5617-7104 | 1488 | |||
| INTERPROSCAN | 5659-7038 | 1380 | |||
| INTERPROSCAN | 5656-5718 | 63 | |||
| INTERPROSCAN | 5794-5862 | 69 | |||
| INTERPROSCAN | 5899-5976 | 78 | |||
| INTERPROSCAN | 6064-6117 | 54 | |||
| INTERPROSCAN | 6157-6228 | 72 | |||
| INTERPROSCAN | 6259-6321 | 63 | |||
| INTERPROSCAN | 6334-6405 | 72 | |||
| INTERPROSCAN | 6493-6561 | 69 | |||
| INTERPROSCAN | 6565-6630 | 66 | |||
| INTERPROSCAN | 6706-6759 | 54 | |||
| INTERPROSCAN | 6955-7026 | 72 | |||
| INTERPROSCAN | 5665-7041 | 1377 | |||
| MOTIF_SEAR_IN_PROT | 5608-7131 | 1524 | |||
| MOTIF_SEAR_IN_PROT | 5614-7131 | 1518 | |||
| MOTIF_SEAR_IN_PROT | 5617-7104 | 1488 | |||
| PROSITE_SCAN | 5620-5643 | 24 | |||
| PROSITE_SCAN | 5674-5685 | 12 | |||
| PROSITE_SCAN | 5722-5730 | 9 | |||
| PROSITE_SCAN | 5779-5796 | 18 | |||
| PROSITE_SCAN | 5860-5877 | 18 | |||
| PROSITE_SCAN | 5893-5901 | 9 | |||
| PROSITE_SCAN | 5920-5937 | 18 | |||
| PROSITE_SCAN | 5938-5955 | 18 | |||
| PROSITE_SCAN | 6046-6057 | 12 | |||
| PROSITE_SCAN | 6088-6105 | 18 | |||
| PROSITE_SCAN | 6187-6198 | 12 | |||
| PROSITE_SCAN | 6244-6255 | 12 | |||
| PROSITE_SCAN | 6256-6267 | 12 | |||
| PROSITE_SCAN | 6445-6462 | 18 | |||
| PROSITE_SCAN | 6505-6522 | 18 | |||
| PROSITE_SCAN | 6610-6621 | 12 | |||
| PROSITE_SCAN | 6622-6630 | 9 | |||
| PROSITE_SCAN | 6637-6648 | 12 | |||
| PROSITE_SCAN | 6676-6687 | 12 | |||
| PROSITE_SCAN | 6802-6813 | 12 | |||
| PROSITE_SCAN | 6808-6819 | 12 | |||
| PROSITE_SCAN | 6856-6867 | 12 | |||
| PROSITE_SCAN | 6868-6876 | 9 | |||
| PROSITE_SCAN | 6916-6927 | 12 | |||
| PROSITE_SCAN | 6979-7005 | 27 | |||
| PROSITE_SCAN | 6988-6999 | 12 | |||
| PROSITE_SCAN | 7009-7020 | 12 | |||
| PROSITE_SCAN | 7045-7056 | 12 | |||
| PROSITE_SCAN | 7138-7146 | 9 | |||
| SBASE | 5608-7065 | 1458 | |||
| RADAR | 6169-6249 | 81 | |||
| RADAR | 6253-6393 | 141 | |||
| RADAR | 6415-6552 | 138 | |||
| RADAR | 5647-5691 | 45 | |||
| RADAR | 6838-6882 | 45 | |||
| TMPRED_SERVER | 5545-5607 | 63 | |||
| TMPRED_SERVER | 5548-5601 | 54 | |||
| TMPRED_SERVER | 6736-6786 | 51 | |||
| TMPRED_SERVER | 6742-6798 | 57 |
Sequence
. . . . . . G:5589
atggcacacaatattatttatggccatggtattattattttcctaaaaaacgtaaacgta C:60
M A H N I I Y G H G I I I F L K N V N V P:20
. . . . . . G:5649
ttccctatttttttgcagatggctttgtggcggcctagtgacagtacggtatatcttcca C:60
F P I F L Q M A L W R P S D S T V Y L P P:20
. . . . . . G:5709
ccaccttctgtggccagagttgtcagcactgatgattatgtgtctcgcacaagcatattt C:60
P P S V A R V V S T D D Y V S R T S I F P:20
. . . . . . G:5769
tatcatgcaggcagttcccgattattaactgtaggcaatccatattttagggttgtacct C:60
Y H A G S S R L L T V G N P Y F R V V P P:20
. . . . . . G:5829
aatggtgcaggtaataaacaggctgttcctaaggtatccgcatatcagtatagggtgttt C:60
N G A G N K Q A V P K V S A Y Q Y R V F P:20
. . . . . . G:5889
agagtagctttacccgatcctaataaatttggattacctgattctactatatataatcct C:60
R V A L P D P N K F G L P D S T I Y N P P:20
. . . . . . G:5949
gaaacacaacgtttggtttgggcatgtgtaggtatggaaattggtcgtgggcagccttta C:60
E T Q R L V W A C V G M E I G R G Q P L P:20
. . . . . . G:6009
ggtattggcctaagtggccatccattttataataaattggatgatacagaaagtgctcat C:60
G I G L S G H P F Y N K L D D T E S A H P:20
. . . . . . G:6069
gcagctacagctgttattacgcaggatgttagggataatgtgtcagttgattataagcaa C:60
A A T A V I T Q D V R D N V S V D Y K Q P:20
. . . . . . G:6129
acacagctgtgtattttaggttgtgtacctgctattggtgagcactgggccaagggcaca C:60
T Q L C I L G C V P A I G E H W A K G T P:20
. . . . . . G:6189
ctttgtaaacctgcacaattgcaacctggtgactgtcctcctttggaacttaaaaacacc C:60
L C K P A Q L Q P G D C P P L E L K N T P:20
. . . . . . G:6249
attattgaggatggtgatatggtggatacaggttatggggcaatggattttagtacattg C:60
I I E D G D M V D T G Y G A M D F S T L P:20
. . . . . . G:6309
caggatacaaagtgcgaggttccattagacatttgtcaatccatctgtaaatatccagat C:60
Q D T K C E V P L D I C Q S I C K Y P D P:20
. . . . . . G:6369
tatttgcaaatgtctgctgatccctatggggattctatgtttttttgcctacgccgtgaa C:60
Y L Q M S A D P Y G D S M F F C L R R E P:20
. . . . . . G:6429
caactgtttgcaagacatttttggaatagggcaggtgttatgggtgacacagtacctacg C:60
Q L F A R H F W N R A G V M G D T V P T P:20
. . . . . . G:6489
gacctatatattaaaggcactagcgctaatatgcgtgaaacccctggcagttgtgtgtat C:60
D L Y I K G T S A N M R E T P G S C V Y P:20
. . . . . . G:6549
tccccttctcccagtggctctattattacttctgattctcaattatttaataagccatat C:60
S P S P S G S I I T S D S Q L F N K P Y P:20
. . . . . . G:6609
tggttacataaggcccagggccataacaatggtatttgttggcataatcagttgtttgtt C:60
W L H K A Q G H N N G I C W H N Q L F V P:20
. . . . . . G:6669
actgtagtggacactacccgcagtactaatttaacattatgtgcctctacacaaaatcct C:60
T V V D T T R S T N L T L C A S T Q N P P:20
. . . . . . G:6729
gtgccaagtacatatgaccctactaagtttaagcagtatagtagacatgtggaggaatat C:60
V P S T Y D P T K F K Q Y S R H V E E Y P:20
. . . . . . G:6789
gatttacagtttatttttcagttgtgcactattactttaactgcagaggttatgtcatat C:60
D L Q F I F Q L C T I T L T A E V M S Y P:20
. . . . . . G:6849
atccatagtatgaatagtagtatattagaaaattggaattttggtgtccctccaccacct C:60
I H S M N S S I L E N W N F G V P P P P P:20
. . . . . . G:6909
actacaagtttggtggatacatatcgttttgtgcaatcagttgctgttacctgtcaaaag C:60
T T S L V D T Y R F V Q S V A V T C Q K P:20
. . . . . . G:6969
gatactacacctccagaaaagcaggatccatatgataaattaaagttttggactgttgac C:60
D T T P P E K Q D P Y D K L K F W T V D P:20
. . . . . . G:7029
ctaaaggaaaaattttcctccgatttggatcaatatccccttggtcgaaagtttttagtt C:60
L K E K F S S D L D Q Y P L G R K F L V P:20
. . . . . . G:7089
caggctgggttacgtcgtaggcctaccataggacctcgtaagcgtcctgctgcttccacg C:60
Q A G L R R R P T I G P R K R P A A S T P:20
G:7149
tctactgcatctactgcatctaggcctgccaaacgtgtacgtatacgtagtaagaaataa C:0
S T A S T A S R P A K R V R I R S K K P:19
