HPV11 L1

Accession: H000113
NC: M14119.1
Uniprot: P04012
Protein: L1
Organism: Human papillomavirus type 11

Function

Major capsid protein. It can form virus-like particles. It forms the pentameric assembly unit of the viral shell.

Mutation

5771-5800
5801-5900
5901-6000
6001-6100
6101-6200
6201-6300
6301-6400
6401-6500
6501-6600
6601-6700
6701-6800
6801-6900
6901-7000
7001-7100
7101-7200
7201-7276
Legend:same sensemissenseinsertiondeletion
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Domain&Motif

method domain/motif name position length description graphical view
CDDLate_protein_L15771-72461476L1 (late) protein;
CDDPHA027785771-72431473major capsid L1 protein; Provisional
MOTIF_SCAN7148-715912
MOTIF_SCAN5933-594412
MOTIF_SCAN6290-630112
MOTIF_SCAN6407-641812
MOTIF_SCAN6605-661612
MOTIF_SCAN6782-679312
MOTIF_SCAN6989-700012
MOTIF_SCAN7250-726112
MOTIF_SCAN6026-603712
MOTIF_SCAN6068-607912
MOTIF_SCAN6557-656812
MOTIF_SCAN6755-676612
MOTIF_SCAN6824-683512
MOTIF_SCAN6947-695812
MOTIF_SCAN6995-700612
MOTIF_SCAN7091-710212
MOTIF_SCAN7127-713812
MOTIF_SCAN6071-608818
MOTIF_SCAN6089-610618
MOTIF_SCAN6158-617518
MOTIF_SCAN6275-629218
MOTIF_SCAN6599-661618
MOTIF_SCAN6650-666718
MOTIF_SCAN6725-674218
MOTIF_SCAN5882-58909
MOTIF_SCAN5918-59269
MOTIF_SCAN6044-60529
MOTIF_SCAN6404-64129
MOTIF_SCAN6767-67759
MOTIF_SCAN7007-70159
MOTIF_SCAN7193-72019
MOTIF_SCAN7265-72739
MOTIF_SCAN5777-580024
MOTIF_SCAN7211-725848
MOTIF_SCAN7211-726454
MOTIF_SCAN5771-72581488
MOTIF_SCAN5771-72581488
INTERPROSCAN5819-71771359
INTERPROSCAN5774-72551482
INTERPROSCAN5825-71771353
INTERPROSCAN5816-587863
INTERPROSCAN5945-601369
INTERPROSCAN6050-612778
INTERPROSCAN6215-626854
INTERPROSCAN6308-637972
INTERPROSCAN6410-647263
INTERPROSCAN6485-655672
INTERPROSCAN6638-670669
INTERPROSCAN6710-677566
INTERPROSCAN6845-689854
INTERPROSCAN7094-716572
MOTIF_SEAR_IN_PROT5771-72671497
MOTIF_SEAR_IN_PROT5771-72581488
MOTIF_SEAR_IN_PROT5774-72551482
PROSITE_SCAN5777-580024
PROSITE_SCAN5882-58909
PROSITE_SCAN5918-59269
PROSITE_SCAN5933-594412
PROSITE_SCAN6026-603712
PROSITE_SCAN6044-60529
PROSITE_SCAN6068-607912
PROSITE_SCAN6071-608818
PROSITE_SCAN6089-610618
PROSITE_SCAN6158-617518
PROSITE_SCAN6275-629218
PROSITE_SCAN6290-630112
PROSITE_SCAN6404-64129
PROSITE_SCAN6407-641812
PROSITE_SCAN6557-656812
PROSITE_SCAN6599-661618
PROSITE_SCAN6605-661612
PROSITE_SCAN6650-666718
PROSITE_SCAN6725-674218
PROSITE_SCAN6755-676612
PROSITE_SCAN6767-67759
PROSITE_SCAN6782-679312
PROSITE_SCAN6824-683512
PROSITE_SCAN6947-695812
PROSITE_SCAN6989-700012
PROSITE_SCAN6995-700612
PROSITE_SCAN7007-70159
PROSITE_SCAN7091-710212
PROSITE_SCAN7127-713812
PROSITE_SCAN7148-715912
PROSITE_SCAN7193-72019
PROSITE_SCAN7211-725848
PROSITE_SCAN7250-726112
PROSITE_SCAN7265-72739
SBASE5771-72281458
RADAR6956-7078123
RADAR7115-7246132
RADAR5933-6178246
RADAR6182-6388207
RADAR6407-6646240
TMPRED_SERVER6875-692551
TMPRED_SERVER6881-693757

Sequence

         .         .         .         .         .         .     G:5830
atgtggcggcctagcgacagcacagtatatgtgcctcctcccaaccctgtatccaaggtt     C:60
M W R P S D S T V Y V P P P N P V S K V      P:20


. . . . . .     G:5890
gttgccacggatgcgtatgttaaacgcaccaacatattttatcatgccagcagttctaga     C:60
V A T D A Y V K R T N I F Y H A S S S R      P:20


. . . . . .     G:5950
ctccttgctgtgggacatccatattactctatcaaaaaagttaacaaaacagttgtacca     C:60
L L A V G H P Y Y S I K K V N K T V V P      P:20


. . . . . .     G:6010
aaggtgtctggatatcaatatagagtgtttaaggtagtgttgccagatcctaacaagttt     C:60
K V S G Y Q Y R V F K V V L P D P N K F      P:20


. . . . . .     G:6070
gcattacctgattcatccctgtttgaccccactacacagcgtttagtatgggcgtgcaca     C:60
A L P D S S L F D P T T Q R L V W A C T      P:20


. . . . . .     G:6130
gggttggaggtaggcaggggtcaacctttaggcgttggtgttagtgggcatccattgcta     C:60
G L E V G R G Q P L G V G V S G H P L L      P:20


. . . . . .     G:6190
aacaaatatgatgatgtagaaaatagtggtgggtatggtggtaatcctggtcaggataat     C:60
N K Y D D V E N S G G Y G G N P G Q D N      P:20


. . . . . .     G:6250
agggttaatgtaggtatggattataaacaaacccagctatgtatggtgggctgtgctcca     C:60
R V N V G M D Y K Q T Q L C M V G C A P      P:20


. . . . . .     G:6310
ccgttaggtgaacattggggtaagggtacacaatgttcaaatacctctgtacaaaatggt     C:60
P L G E H W G K G T Q C S N T S V Q N G      P:20


. . . . . .     G:6370
gactgccccccgttggaacttattaccagtgttatacaggatggggacatggttgataca     C:60
D C P P L E L I T S V I Q D G D M V D T      P:20


. . . . . .     G:6430
ggctttggtgctatgaattttgcagacttacaaaccaataaatcggatgttccccttgat     C:60
G F G A M N F A D L Q T N K S D V P L D      P:20


. . . . . .     G:6490
atttgtggaactgtctgcaaatatcctgattatttgcaaatggctgcagacccttatggt     C:60
I C G T V C K Y P D Y L Q M A A D P Y G      P:20


. . . . . .     G:6550
gataggttgtttttttatttgcgaaaggaacaaatgtttgctagacacttttttaatagg     C:60
D R L F F Y L R K E Q M F A R H F F N R      P:20


. . . . . .     G:6610
gccggtactgtgggggaacctgtgcctgatgacctgttggtaaaagggggtaataacaga     C:60
A G T V G E P V P D D L L V K G G N N R      P:20


. . . . . .     G:6670
tcatctgtagctagtagtatttatgtacatacacctagtggctcattggtgtcttcagag     C:60
S S V A S S I Y V H T P S G S L V S S E      P:20


. . . . . .     G:6730
gctcaattatttaataaaccatattggcttcaaaaggctcagggacataacaatggtatt     C:60
A Q L F N K P Y W L Q K A Q G H N N G I      P:20


. . . . . .     G:6790
tgctggggaaaccacttgtttgttactgtggtagataccacacgcagtacaaatatgaca     C:60
C W G N H L F V T V V D T T R S T N M T      P:20


. . . . . .     G:6850
ctatgtgcatctgtgtctaaatctgctacatacactaattcagattataaggaatacatg     C:60
L C A S V S K S A T Y T N S D Y K E Y M      P:20


. . . . . .     G:6910
cgccatgtggaggagtttgatttacagtttatttttcaattgtgtagcattacattatct     C:60
R H V E E F D L Q F I F Q L C S I T L S      P:20


. . . . . .     G:6970
gcagaagtcatggcctatatacacacaatgaatccttctgttttggaggactggaacttt     C:60
A E V M A Y I H T M N P S V L E D W N F      P:20


. . . . . .     G:7030
ggtttatcgcctccaccaaatggtacactggaggatacttatagatatgtacagtcacag     C:60
G L S P P P N G T L E D T Y R Y V Q S Q      P:20


. . . . . .     G:7090
gccattacctgtcagaaacccacacctgaaaaagaaaaacaggatccctataaggatatg     C:60
A I T C Q K P T P E K E K Q D P Y K D M      P:20


. . . . . .     G:7150
agtttttgggaggttaacttaaaagaaaagttttcaagtgaattagatcagtttcccctt     C:60
S F W E V N L K E K F S S E L D Q F P L      P:20


. . . . . .     G:7210
ggacgtaagtttttattgcaaagtggatatcgaggacggacgtctgctcgtacaggtata     C:60
G R K F L L Q S G Y R G R T S A R T G I      P:20


. . . . . .     G:7270
aagcgcccagctgtgtctaagccctctacagcccccaaacgaaaacgtaccaaaaccaaa     C:60
K R P A V S K P S T A P K R K R T K T K      P:20


     G:7276
aagtaa      C:6
K      P:1


Legend:gene mutationamino acid mutation

Structure&Mutation

5771
7246
Legend:HelixTurnBeta strandMutation
Feature keyPosition(s)Lengthgraphical view
Helix5837-58459
Beta strand5852-588130
Beta strand5891-591727
Beta strand5930-594718
Beta strand5972-598918
Turn5999-60079
Turn6038-60469
Beta strand6047-608842
Beta strand6110-613021
Beta strand6194-621118
Beta strand6218-624730
Beta strand6254-627421
Beta strand6323-634321
Beta strand6380-63889
Helix6389-640012
Turn6425-643915
Beta strand6440-645718
Helix6461-647515
Beta strand6500-654748
Beta strand6554-656815
Helix6578-65869
Helix6602-661312
Beta strand6632-664918
Helix6665-66739
Beta strand6680-66889
Beta strand6710-67189
Helix6734-67429
Beta strand6749-676618
Beta strand6785-680521
Beta strand6815-68239
Helix6827-68359
Beta strand6836-690469
Helix6911-694030
Helix6944-696118
Beta strand7082-70909
Beta strand7097-710812
Helix7112-71209
Helix7133-71419
Helix7145-717127