HPV16 E6

Accession: H000069
NC: NP_041325.1
Uniprot: P03126
Protein: E6
Organism: Human papillomavirus type 16

Function

It is an oncogenic protein which causes transformation of host cell by binding to p53 tumour suppressor protein. For binding, it requires E6-associated protein (E6-AP) which is involved in the ubiquitin ligase pathway. E6-AP binds ubiquitin to the p53 pro

Mutation

83-100
101-200
201-300
301-400
401-500
501-559
Legend:same sensemissenseinsertiondeletion
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Domain&Motif

method domain/motif name position length description graphical view
CDDE6191-505315Early Protein(E6)
CDDPHA02779131-505375E6 protein; Provisional
CDDPHA02775128-505378E6;Provisional
MOTIF_SCAN539-55012
MOTIF_SCAN167-17812
MOTIF_SCAN359-37012
MOTIF_SCAN536-54712
MOTIF_SCAN272-28918
MOTIF_SCAN500-5089
MOTIF_SCAN527-5359
MOTIF_SCAN536-5449
MOTIF_SCAN317-34024
MOTIF_SCAN404-556153
MOTIF_SCAN92-13645
MOTIF_SCAN191-520330
MOTIF_SCAN191-520330
INTERPROSCAN191-520330
MOTIF_SEAR_IN_PROT191-520330
MOTIF_SEAR_IN_PROT131-520390
MOTIF_SEAR_IN_PROT128-520393
MOTIF_SEAR_IN_PROT203-28078
MOTIF_SEAR_IN_PROT191-520330
PROSITE_SCAN167-17812
PROSITE_SCAN272-28918
PROSITE_SCAN317-34024
PROSITE_SCAN359-37012
PROSITE_SCAN500-5089
PROSITE_SCAN527-5359
PROSITE_SCAN536-5449
PROSITE_SCAN536-54712
PROSITE_SCAN539-55012
SBASE89-18496
SBASE191-505315
UNIPROTKB191-301111
UNIPROTKB410-520111
UNIPROTKB545-55612

Sequence

         .         .         .         .         .         .     G:142
atgcaccaaaagagaactgcaatgtttcaggacccacaggagcgacccagaaagttacca     C:60
M H Q K R T A M F Q D P Q E R P R K L P      P:20


. . . . . .     G:202
cagttatgcacagagctgcaaacaactatacatgatataatattagaatgtgtgtactgc     C:60
Q L C T E L Q T T I H D I I L E C V Y C      P:20


. . . . . .     G:262
aagcaacagttactgcgacgtgaggtatatgactttgcttttcgggatttatgcatagta     C:60
K Q Q L L R R E V Y D F A F R D L C I V      P:20


. . . . . .     G:322
tatagagatgggaatccatatgctgtatgtgataaatgtttaaagttttattctaaaatt     C:60
Y R D G N P Y A V C D K C L K F Y S K I      P:20


. . . . . .     G:382
agtgagtatagacattattgttatagtttgtatggaacaacattagaacagcaatacaac     C:60
S E Y R H Y C Y S L Y G T T L E Q Q Y N      P:20


. . . . . .     G:442
aaaccgttgtgtgatttgttaattaggtgtattaactgtcaaaagccactGtgtcctgaa     C:60
K P L C D L L I R C I N C Q K P L C P E      P:20


. . . . . .     G:502
gaaaagcaaagacatctggacaaaaagcaaagattccataatataaggggtcggtggacc     C:60
E K Q R H L D K K Q R F H N I R G R W T      P:20


. . . . .      G:559
ggtcgatgtatgtcttgttgcagatcatcaagaacacgtagagaaacccagctgtaa      C:57
G R C M S C C R S S R T R R E T Q L      P:18


Legend:gene mutationamino acid mutation

Structure&Mutation

83
559
Legend:HelixTurnBeta strandMutation
Feature keyPosition(s)Lengthgraphical view
Turn116-1249
Helix137-15721
Turn170-1789
Turn194-2029
Helix218-24427
Beta strand260-2689
Beta strand275-28612
Helix293-33745
Beta strand338-35215
Helix356-37924
Helix389-3979
Beta strand404-4129
Turn413-4219
Helix437-46327
Beta strand476-48712
Beta strand494-50512
Turn515-5239
Beta strand545-55612