HPV18 L1
Accession: H000198
NC: AY262282.1
Uniprot: Q80B70
Protein: L1
Organism: Human papillomavirus type 18
Function
Major capsid protein. It can form virus-like particles. It forms the pentameric assembly unit of the viral shell.
Sequence&Mutation
. . . . . . G:5489
atgtgcctgtatacacgggtcctgatattacattaccatctactacctctgtatggccca C:60
M C L Y T R V L I L H Y H L L P L Y G P P:20
. . . . . . G:5549
ttgtatcacccacggcccctgcctctacacagtatattggtatacatggtacacattatt C:60
L Y H P R P L P L H S I L V Y M V H I I P:20
. . . . . . G:5609
atttgtggccattatattattttattcctaagaaacgtaaacgtgttccctatttttttg C:60
I C G H Y I I L F L R N V N V F P I F L P:20
. . . . . . G:5669
cagatggctttgtggcggcctagtgacaataccgtatatcttccacctccttctgtggca C:60
Q M A L W R P S D N T V Y L P P P S V A P:20
. . . . . . G:5729
agagttgtaaataccgatgattatgtgactcgcacaagcatattttatcatgctggcagc C:60
R V V N T D D Y V T R T S I F Y H A G S P:20
. . . . . . G:5789
tctagattattaactgttggtaatccatattttagggttcctgcaggtggtggcaataag C:60
S R L L T V G N P Y F R V P A G G G N K P:20
. . . . . . G:5849
caggatattcctaaggtttctgcataccaatatagagtatttagggtgcagttacctgac C:60
Q D I P K V S A Y Q Y R V F R V Q L P D P:20
. . . . . . G:5909
ccaaataaatttggtttacctgatactagtatttataatcctgaaacacaacgtttagtg C:60
P N K F G L P D T S I Y N P E T Q R L V P:20
. . . . . . G:5969
tgggcctgtgctggagtggaaattggccgtggtcagcctttaggtgttggccttagtggg C:60
W A C A G V E I G R G Q P L G V G L S G P:20
. . . . . . G:6029
catccattttataataaattagatgacactgaaagttcccatgccgccacgtctaatgtt C:60
H P F Y N K L D D T E S S H A A T S N V P:20
. . . . . . G:6089
tctgaggacgttagggacaatgtgtctgtagattataagcagacacagttatgtattttg C:60
S E D V R D N V S V D Y K Q T Q L C I L P:20
. . . . . . G:6149
ggctgtgcccctgctattggggaacactgggctaaaggcactgcttgtaaatcgcgtcct C:60
G C A P A I G E H W A K G T A C K S R P P:20
. . . . . . G:6209
ttatcacagggcgattgcccccctttagaacttaaaaacacagttttggaagatggtgat C:60
L S Q G D C P P L E L K N T V L E D G D P:20
. . . . . . G:6269
atggtagatactggatatggtgccatggactttagtacattgcaagatactaaatgtgag C:60
M V D T G Y G A M D F S T L Q D T K C E P:20
. . . . . . G:6329
gtaccattggatatttgtcagtctatttgtaaatatcctgattatttacaaatgtctgca C:60
V P L D I C Q S I C K Y P D Y L Q M S A P:20
. . . . . . G:6389
gatccttatggggattccatgtttttttgcttacggcgtgagcagctttttgctaggcat C:60
D P Y G D S M F F C L R R E Q L F A R H P:20
. . . . . . G:6449
ttttggaatagagcaggtactatgggtgacactgtgcctcaatccttatatattaaaggc C:60
F W N R A G T M G D T V P Q S L Y I K G P:20
. . . . . . G:6509
acaggtatgcgtgcttcacctggcagctgtgtgtattctccctctccaagtggctctatt C:60
T G M R A S P G S C V Y S P S P S G S I P:20
. . . . . . G:6569
gttacctctgactcccagttgtttaataaaccatattggttacataaggcacagggtcat C:60
V T S D S Q L F N K P Y W L H K A Q G H P:20
. . . . . . G:6629
aacaatggtgtttgctggcataatcaattatttgttactgtggtagataccactcgcagt C:60
N N G V C W H N Q L F V T V V D T T R S P:20
. . . . . . G:6689
accaatttaacaatatgtgcttctacacagtctcctgtacctgggcaatatgatgctacc C:60
T N L T I C A S T Q S P V P G Q Y D A T P:20
. . . . . . G:6749
aaatttaagcagtatagcagacatgttgaggaatatgatttgcagtttatttttcagttg C:60
K F K Q Y S R H V E E Y D L Q F I F Q L P:20
. . . . . . G:6809
tgtactattactttaactgcagatgttatgtcctatattcatagtatgaatagcagtatt C:60
C T I T L T A D V M S Y I H S M N S S I P:20
. . . . . . G:6869
ttagaggattggaactttggtgttccccccccgccaactactagtttggtggatacatat C:60
L E D W N F G V P P P P T T S L V D T Y P:20
. . . . . . G:6929
cgttttgtacaatctgttgctattacctgtcaaaaggatgctgcaccggctgaaaataag C:60
R F V Q S V A I T C Q K D A A P A E N K P:20
. . . . . . G:6989
gatccctatgataagttaaagttttggaatgtggatttaaaggaaaagttttctttagac C:60
D P Y D K L K F W N V D L K E K F S L D P:20
. . . . . . G:7049
ttagatcaatatccccttggacgtaaatttttggttcaggctggattgcgtcgcaagccc C:60
L D Q Y P L G R K F L V Q A G L R R K P P:20
. . . . . . G:7109
accataggccctcgcaaacgttctgctccatctgccactacgtcttctaaacctgccaag C:60
T I G P R K R S A P S A T T S S K P A K P:20
. . G:7136
cgtgtgcgtgtacgtgccaggaagtaa C:27
R V R V R A R K P:8
Epitope&Mutation
Legend:mutationepitope
>H000198_L1
MCLYTRVLILHYHLLPLYGPLYHPRPLPLHSILVYMVHIIICGHYIILFLRNVNVFPIFLQMALWRPSDNTVYLPPPSVARVVNTDDYVTRTSIFYHAGSSRLLTVGNPYFRVPAGGGNKQDIPKVSAYQYRVFRVQLPDPNKFGLPDTSIYNPETQRLVWACAGVEIGRGQPLGVGLSGHPFYNKLDDTESSHAATSNVSEDVRDNVSVDYKQTQLCILGCAPAIGEHWAKGTACKSRPLSQGDCPPLELKNTVLEDGDMVDTGYGAMDFSTLQDTKCEVPLDICQSICKYPDYLQMSADPYGDSMFFCLRREQLFARHFWNRAGTMGDTVPQSLYIKGTGMRASPGSCVYSPSPSGSIVTSDSQLFNKPYWLHKAQGHNNGVCWHNQLFVTVVDTTRSTNLTICASTQSPVPGQYDATKFKQYSRHVEEYDLQFIFQLCTITLTADVMSYIHSMNSSILEDWNFGVPPPPTTSLVDTYRFVQSVAITCQKDAAPAENKDPYDKLKFWNVDLKEKFSLDLDQYPLGRKFLVQAGLRRKPTIGPRKRSAPSATTSSKPAKRVRVRARK
·····················································NVFPIFLQM(Cw4)·····················································································································································································································································································································································································································································································································
·····························································································································VSAYQYRVFRVQLPDP(DR4Dw4)···································································································································································································································································································································································································································
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